Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2504 ATGGATTACTTAAGTGCTGAATTGGCTCAGGGCTTAAGTGATGTTTCTATTCCTTATCCTAAGCCTCAACCTGCACCACCAGATCGTCTTTCTTCTCATAGTAGAAATGGCAATAAGGTTTTCAAGAGAGGGCCGCTTTTCATATCTTCCAAAGGAGGAATTGGATGGACATCCTGGAAGAAAAGGTGGTTTATTTTGACACAAACTTCGCTTGTTTTCTTCAGAAGTGATCCAAATGTTGTTTCTCAAAAGGGAAATGAAGTGAATTTTACTCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTTCTGTCAAAGCAGATAAGAAACTTTTGACTGTACAATTTCCTGATGTTCCTGATGGACGAGTATTCACACTTAAGGCTGAAACTACTGAGGATTTATATGAATGGAAAACTGCACTTGAGAATGTTATGGCACATGCACCAAGTGCTACTAATGTGATGGGGCAAAGTGGTATCTTTAGGAGTGATCAGGCTGATTCACTCGGTATCTATTTGGACCAGTTGAAGGATAAAGAAACAGTAAAATATGCAGTCCTTGGCCGGCCAATTTTAGTTGCTTTGGAGGAAGTTGATGGAACTCCATCTTTTTTGGAAAAAGCCCTGAGGTTCGTAGAAGAGCATGGAGCCAAAGTAGAAGGGGTCTTGCGGCAAGCAGCCGATGTTGAAGATGTTGAAAATCGGGTGCGGGAATATGAACAAGGAAAAGTTGAATTCTCTGAGGAGGAGGATGCACATGTTGTTGCTGATTGTATTAAGCTTGTAATTCGTGAATTGCCGTCTTTTCCAGTCCCAGCATCTTGTTGTAAGGCGTTGTTAGAAGCTTCTCGAACTGCACACGGGAATAGGGTTTCTGCTATGCGTGCAGCAATATGGGACACTTTTCCTGAACCAAACCGTCGTTTGTTGCAAAGACTACTCCTCATGATGCAAGCAGTGGCTTCCCGAAAAGCTGAGAACAGAATGAGCTCATCAGCTGTGGCAGCATGCATGGCACCATTGCTTCTTCGGCCCCTTCTAATTGGTGATTGTGAGATTGAAAATGATTTTGATGTAGGTGGGGATGGTTCCATTCAACTTCTACAAGCAGCTGCTGCAGCTAACCATGCTCAAGCAATTGTTATTACTTTATTAGAAGAATATAACAACATATTTGAGGAAGGTTCTTCATCACCCGGCCCTGATATGTACATGGATTCAGAAGATGATGAATCTGAGAGCGAGGAGGCTACTGATGATGATTTGTCCTATGATGATTCTTATGATGATGAGCAAGATGAATCAATAGAGGGGTCTGATGTAGATGAAGATCTTGTTAGTGAAACCAACAGCGAGACCGGAGACTCTGCAGTTAATGATGAATATAATGATAAGGACCATAATATTTCACATTCAAGTTCAAACTCCTCACAGGTAAGTGATTATGTTGAAGTCGACCAAAAGTTATCAACAATGTCACTTGAAGTCTCATTGCCTCAGTCTGAAGATATCAAAAGCTGTGAAAATTTTGCAAGCCAAAATAACAATGCTTGTGCGATGCCCTGTGAAAATTTCACAAGCCAAAATAAGACTGTTTTTGCAAATGACTCCACTAAGCCCACTGATATAATTGAAGGCATATCTCCTGACCAAACTACGGTGAATCAATCAAATTCTCCTAGCTCTACTTCATGTATGGACAAATCTAATGGAAGAATGCATCGGCGCCGCACTGTTTTGAGGCGAAACTCTGGAAGCAAGAACCTTTCCATGGAATGCATTGATTTTCTAGATGATAATGAAGCTGAAGTTGAGAGGCTTGAAGCTGTTATGACAGAATTGCAATGCCAAATTGCAGAGGAGGTAAAAGTAAATGCAAAGCTGCAATCTTACGTGGAAACCCGAAAGGAAGCCTTGCAAGAGCGTCGTCTAGTTCTTGAGCGAAATGTAGGTAAACTACATGAACAGTTGCTCAAGGAGAAGAGCTTTAGGGCAACTCTGGAAGCAGGACTAAAGTTTCCTCCAGAGACATTATCTGAATTATCTGATATTGACGAAAAGACCAAGACAGACTTTCAGGAATTAGTGCTGATAGAAGCAGATCTTGCTAACTTAGAATGGAAGGTTAATGAGCTTGGGTTACGGCTTAATGCACAACTTGAATGGAGTTATGGTTCCATGCAAAGTTTCTTCGATCAAACCCAACAGATATCAAGCCATGAAAGAAATTTGAAGAATAGGCCGGATACTGAAGGTTCAGCCATTTCAGAATTTGACAGATCAATAAGAAAGCAGAACAGTCATTTTGTTGGAGCAGAAAATGAGAATGAGAGAATACCAGAGTCAACACCGTCACCAAACAAACATCCGCCTTGTTCCAAGAAATCTGTTACAAGGGTTGAGGGTGCAAATTCCACTACTTCTACAATTACAAGACTGACATCCAAACTAAACTTTTTGAAGGATCGTCGTAGTCAGTTTTCTAGTCAACTCCGAAACATGAGTAAAGAAAAAGGATTTGAACTTCAGCTTCCACCTCCATCTCCCAACAAGTCTCGAGGATTTGATTTTCACATATCACTTCGATCCCCAAATAAGTCTCGAGGAAATGAACGTCACTCACCACTTTCATCCCCCAATAAGTCTCGAGGGTGTGAATTTTACATATCTCTTAAATCTCCAAATAAGTCTCGAGGATCTGAGAATCATTCTCCACCAAACCCTGAGAAAGTTAGAGGCAATGAAGATCAATCACTTGGAATCTCGGATATTCAGAGAAATTGA 2787 0.4105 MDYLSAELAQGLSDVSIPYPKPQPAPPDRLSSHSRNGNKVFKRGPLFISSKGGIGWTSWKKRWFILTQTSLVFFRSDPNVVSQKGNEVNFTLGGIDLNNSGSVSVKADKKLLTVQFPDVPDGRVFTLKAETTEDLYEWKTALENVMAHAPSATNVMGQSGIFRSDQADSLGIYLDQLKDKETVKYAVLGRPILVALEEVDGTPSFLEKALRFVEEHGAKVEGVLRQAADVEDVENRVREYEQGKVEFSEEEDAHVVADCIKLVIRELPSFPVPASCCKALLEASRTAHGNRVSAMRAAIWDTFPEPNRRLLQRLLLMMQAVASRKAENRMSSSAVAACMAPLLLRPLLIGDCEIENDFDVGGDGSIQLLQAAAAANHAQAIVITLLEEYNNIFEEGSSSPGPDMYMDSEDDESESEEATDDDLSYDDSYDDEQDESIEGSDVDEDLVSETNSETGDSAVNDEYNDKDHNISHSSSNSSQVSDYVEVDQKLSTMSLEVSLPQSEDIKSCENFASQNNNACAMPCENFTSQNKTVFANDSTKPTDIIEGISPDQTTVNQSNSPSSTSCMDKSNGRMHRRRTVLRRNSGSKNLSMECIDFLDDNEAEVERLEAVMTELQCQIAEEVKVNAKLQSYVETRKEALQERRLVLERNVGKLHEQLLKEKSFRATLEAGLKFPPETLSELSDIDEKTKTDFQELVLIEADLANLEWKVNELGLRLNAQLEWSYGSMQSFFDQTQQISSHERNLKNRPDTEGSAISEFDRSIRKQNSHFVGAENENERIPESTPSPNKHPPCSKKSVTRVEGANSTTSTITRLTSKLNFLKDRRSQFSSQLRNMSKEKGFELQLPPPSPNKSRGFDFHISLRSPNKSRGNERHSPLSSPNKSRGCEFYISLKSPNKSRGSENHSPPNPEKVRGNEDQSLGISDIQRN* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2504 928 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 19 839 - -
Tpr4g2504 928 MobiDBLite consensus disorder prediction 779 810 - -
Tpr4g2504 928 MobiDBLite consensus disorder prediction 16 35 - -
Tpr4g2504 928 SMART PH_update 40 149 IPR001849 -
Tpr4g2504 928 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 19 839 - -
Tpr4g2504 928 CDD RhoGAP 203 356 - -
Tpr4g2504 928 SUPERFAMILY GTPase activation domain, GAP 202 395 IPR008936 GO:0007165
Tpr4g2504 928 SMART RhoGAP_3 200 390 IPR000198 GO:0007165
Tpr4g2504 928 Coils Coil 818 838 - -
Tpr4g2504 928 Coils Coil 598 625 - -
Tpr4g2504 928 Gene3D - 28 148 IPR011993 -
Tpr4g2504 928 ProSiteProfiles PH domain profile. 39 147 IPR001849 -
Tpr4g2504 928 Coils Coil 230 250 - -
Tpr4g2504 928 MobiDBLite consensus disorder prediction 405 450 - -
Tpr4g2504 928 CDD PH 42 142 - -
Tpr4g2504 928 MobiDBLite consensus disorder prediction 394 464 - -
Tpr4g2504 928 MobiDBLite consensus disorder prediction 769 810 - -
Tpr4g2504 928 Coils Coil 637 657 - -
Tpr4g2504 928 Pfam Leucine-zipper of ternary complex factor MIP1 640 720 IPR025757 -
Tpr4g2504 928 Gene3D Rho GTPase activation protein 173 395 IPR008936 GO:0007165
Tpr4g2504 928 MobiDBLite consensus disorder prediction 863 928 - -
Tpr4g2504 928 Pfam RhoGAP domain 203 346 IPR000198 GO:0007165
Tpr4g2504 928 MobiDBLite consensus disorder prediction 553 574 - -
Tpr4g2504 928 MobiDBLite consensus disorder prediction 553 569 - -
Tpr4g2504 928 MobiDBLite consensus disorder prediction 871 885 - -
Tpr4g2504 928 SUPERFAMILY PH domain-like 20 145 - -
Tpr4g2504 928 Pfam PH domain 42 146 IPR001849 -
Tpr4g2504 928 ProSiteProfiles Rho GTPase-activating proteins domain profile. 194 393 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2504 Tpr-Chr4 27081053 27097722 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2504 - - cam:101498807 1373.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2504 4 27081053 27097722 Tpr4g2504 4 27081053 27097722 ECH