LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr4g2498	ATGGCTTCAATTTCAACCATTTATTCATCTTCACCAACACTCAACTATCAAAATATTCAAACAAATCAAAACGCATTCGCTAATTCAATACGACGTCGTTCCCATCTCCCTATATACCAAACCCGACCTAAACTCTCCCCAACCCGCTCCGTCGCGCGCGAGGTTCCAACCGATCTCTCCGCCGTTTCAGCAACAAACAACCGCCGTCTCGAGAAAGAGCCACGTGCTTTATGGCGTCGTTACGTTGACTGGCTATACCAACACAAAGAAATCGGGTTATATCTGGATGTGAGTCGGGTCGGGTTTACCGATGAGTTTGTTAAAGAGATGGAACCGCGATTTGAGGCGGCGTTTAAAGCTATGGAGGAGCTTGAAAAAGGTGCGATTGCGAATCCTGATGAAGGTCGTATGGTTGGACATTATTGGCTTAGGGATTCCAATCGTGCTCCTAATTCGTTTCTTAAGAATCAGATTGATAATACTCTTGATGCGATTTGTGGATTCGCTAATGATATCGTCTCTGGTAAGATTAAGCCTCCTTCATCGCCTGAGGGAAGGTTTACTCAGATACTTTCTGTTGGGATTGGAGGTTCTGCACTTGGACCACAGTTTGTTGCAGAGGCACTTGCTCCTGATAATCCTCCACTCAAGATAAGATTTATTGACAACACAGATCCTGCTGGCATTGATCATCAGATTGCACAACTCGGCCCTGAACTAGCTTCGACACTTGTAATCGTGATTTCTAAGAGTGGAGGTACTCCCGAAACTAGAAATGGCTTGTTAGAAGTACAGAAGGCCTTTCGTGAAGCAGGATTGGATTTCCCAAAACAGGGTGTTGCTATAACACAAGAAAATTCTTTGTTGGATAATACTGCTAGAATTGAGGGATGGTTAGCAAGATTTCCCATGTTTGACTGGGTGGGAGGTAGAACGTCAGAGATGTCTGCAGTCGGCCTGCTTCCAGCAGCTCTGCAGACCATTGACATTAGAGAAATGCTTCTTGGTGCATCACTGATGGATGAGGCAAATAGGAGTACTGTGATAAAGAACAATCCTGCTGCTTTGCTGGCTTTATGTTGGTATTGGGCTACAGATGGTGTAGGATCCAAGGATATGGTTATCCTTCCGTACAAGGACAGCCTGTTATTATTTAGTAGATACTTGCAGCAACTGGTCATGGAATCTCTGGGCAAGGAATATGACTTGGATGGTAATCGGGTTAATCAAGGAATTAGTGTCTATGGAAATAAAGGAAGCACGGATCAACATGCCTATATTCAGCAACTGAGGGAAGGTGTACACAATTTCTTTGCAACATTCATTGAGGTGCTGCGTGATAGACCACCTGGTCATGATTGGGAGCTTGAACCAGGTGTTACCAGTGGTGACTACCTGTTTGGTATGCTACAGGGAACAAGGTCAGCTTTGTACGCTAATGACCGCGAATCTATCACAGTCACTGTGCAAGAAGTGACTCCCAGAGCTGTTGGAGCCCTTGTTGCACTGTATGAACGAGCAGTTGGGATATATGCCTCACTTGTCAACATAAATGCTTATCACCAGCCTGGTGTGGAAGCGGGTAAAAAAGCAGCAGGAGAAGTATTAGCACTTCAGAAGCGGGTGTTGGCAGTGTTAAATGAGGCAAGCTGCAAGGAGCCTATTGAACCATTGACGATTGAAGAAGTAGCTGAACGTTGCCATGCTCCAGAAGATATTGAAGTAATTTACAAGATTATTGCTCATATGGCTGCCAATGACAGAGCACTAATTGCTGAAGGTAACTGTGGTTCTCCAAGGAGCGTCAAAGTTTTTCTGGGAGAGTGTAATGTTGATGAACTGTATGCATGA	1851	0.4473	MASISTIYSSSPTLNYQNIQTNQNAFANSIRRRSHLPIYQTRPKLSPTRSVAREVPTDLSAVSATNNRRLEKEPRALWRRYVDWLYQHKEIGLYLDVSRVGFTDEFVKEMEPRFEAAFKAMEELEKGAIANPDEGRMVGHYWLRDSNRAPNSFLKNQIDNTLDAICGFANDIVSGKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQTIDIREMLLGASLMDEANRSTVIKNNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEYDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTSGDYLFGMLQGTRSALYANDRESITVTVQEVTPRAVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPIEPLTIEEVAERCHAPEDIEVIYKIIAHMAANDRALIAEGNCGSPRSVKVFLGECNVDELYA*	617

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr4g2498	616	Pfam	Phosphoglucose isomerase	119	446	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Tpr4g2498	616	Pfam	Phosphoglucose isomerase	477	537	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Tpr4g2498	616	Hamap	Glucose-6-phosphate isomerase [pgi].	90	539	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Tpr4g2498	616	ProSitePatterns	Phosphoglucose isomerase signature 2.	512	529	IPR018189	GO:0004347\|GO:0006094\|GO:0006096
	Tpr4g2498	616	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	616	-	-
	Tpr4g2498	616	ProSiteProfiles	Glucose-6-phosphate isomerase family profile.	48	545	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Tpr4g2498	616	CDD	SIS_PGI_1	159	325	IPR035476	-
	Tpr4g2498	616	Gene3D	-	176	321	-	-
	Tpr4g2498	616	SUPERFAMILY	SIS domain	66	539	IPR046348	GO:0097367\|GO:1901135
	Tpr4g2498	616	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	616	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Tpr4g2498	616	Gene3D	-	322	521	-	-
	Tpr4g2498	616	PRINTS	Glucose-6-phosphate isomerase signature	190	209	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Tpr4g2498	616	PRINTS	Glucose-6-phosphate isomerase signature	302	320	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Tpr4g2498	616	PRINTS	Glucose-6-phosphate isomerase signature	378	399	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Tpr4g2498	616	PRINTS	Glucose-6-phosphate isomerase signature	480	498	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Tpr4g2498	616	PRINTS	Glucose-6-phosphate isomerase signature	498	512	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Tpr4g2498	616	PRINTS	Glucose-6-phosphate isomerase signature	512	525	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Tpr4g2498	616	CDD	SIS_PGI_2	371	535	IPR035482	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr4g2498	Tpr-Chr4	27010977	27021313	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr4g2498	K01810		-	gmx:100809452	1072

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr4g2498	4	27010977	27021313	Tpr4g2498	4	27010977	27021313	ECH