Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2492 ATGGCTAAACTTAATGAAGATGTTACTGAGTTTGAAAAAGTGAATGAGAAACTTACTGAGTTTGATACCGCGTTTGGTTTTCCTACTGAGTTTCCTTACGAGTTTGACTCGTTTGAAACTGAAAACAGTGATGAGGAAGATTTCTTTGCTGGTTTAACTCGTCGACTGAGTCAAACCTCGCTTAACGAAACTCGGAAGCAACTCAGCGAACTCAGTGCTCCCATTTTCAACAGCGAAAAACCTGAGATTCATGAGAAGGTTCGAGTTATGGCTGGTTCACCTCAGTCGACGTTAGCCGGAATCGGAAGCTGGTCGGGTCGTAGCGGCGGGTCAAGTGACGGAAGTCCAAACGGTTCAACTCGTGTACCTTCGCCAACAACAATACCGTTCTCCACCGGAAACGACGCTTGGGAGGTTTTATACGCCGCTGCCGGTGAAGTTGCAAGGTTGAAGATGAACAACGAAGCTTCGTTGTTCGAGTTTCAGAACAAAAGAGGACTACTCGGCGGCCTTCCACCACCTATCACGGCGGAGAATCGCGCCGCAGCTTTGTTCGGAAACCCTAATCCTTCTCATGTTCAGTATCATCAATTGAAGCAACAGTGTGAATCAATTTGGGGAAGACAAGCCCGGGTCCAGGCCCAGGCCCAAGCAAAGGAAGCTAGTTGGTTGGCTCATCAGGTTCAGAGCAGAGGATATGAATATGAAGGAATGAAATGCATGCGGGCTTTGCCTCGTCCAGCATGGCATTCAACTATGCAAGTGAAGCAGCACCAAAATAATCCGGGTCTTTTCAACGGATCCGGGTCTGGTTCAAGACCCGGTTTATATAATGGATCTGATGTGAAAAGAGGATGTGGAGGAACAGGGGTGTTCTTACCTCGTCCATATGGGACCCCTCCTCCTGAATCTCGCAAGAAAACAAGTAACAATCATGAACCATTTGTGTGTCGCAAGAAAACAGGTCGTTCAAGTGTTTTGGTCCCAGCTAAGGTTATTCATGCTTTGAATTTGACTATTGATGACTTTAATGGTGGTAGACAACCTTGTTTTTCAAATGATTTTGGTGTGGATTATGATGCATTGTTGGCAAGGAGAAATGCTCTTGTGATGCAGCAGAGATTAAGAATGCAAAGAGAAGAGGCAGCTAGTTATGAAAATCGTTTGCCTCAGGAATGGACTTATTGA 1188 0.4579 MAKLNEDVTEFEKVNEKLTEFDTAFGFPTEFPYEFDSFETENSDEEDFFAGLTRRLSQTSLNETRKQLSELSAPIFNSEKPEIHEKVRVMAGSPQSTLAGIGSWSGRSGGSSDGSPNGSTRVPSPTTIPFSTGNDAWEVLYAAAGEVARLKMNNEASLFEFQNKRGLLGGLPPPITAENRAAALFGNPNPSHVQYHQLKQQCESIWGRQARVQAQAQAKEASWLAHQVQSRGYEYEGMKCMRALPRPAWHSTMQVKQHQNNPGLFNGSGSGSRPGLYNGSDVKRGCGGTGVFLPRPYGTPPPESRKKTSNNHEPFVCRKKTGRSSVLVPAKVIHALNLTIDDFNGGRQPCFSNDFGVDYDALLARRNALVMQQRLRMQREEAASYENRLPQEWTY* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2492 395 MobiDBLite consensus disorder prediction 291 313 - -
Tpr4g2492 395 PANTHER TIP41-LIKE PROTEIN 22 395 - -
Tpr4g2492 395 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1-LIKE 22 395 - -
Tpr4g2492 395 MobiDBLite consensus disorder prediction 105 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2492 Tpr-Chr4 26689580 26691934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2492 - - gmx:100816574 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0889 7 7897734 7899706 Tpr4g2492 4 26689580 26691934 ECH
Tpr6g2370 6 26011047 26013923 Tpr4g2492 4 26689580 26691934 ECH
Tpr4g2492 4 26689580 26691934 Tpr4g2492 4 26689580 26691934 ECH
Tpr7g0889 7 7897734 7899706 Tpr4g2492 4 26689580 26691934 PCT