Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2488 ATGGTTCCTTTAGGTTGGATAGGTGGTGGTGTTGGTTTAATTCTTGCAACTGCTATATCACTTTATGCAAATGCTCTTATTGCTATGCTTCATGAATTTGGTGGAACAAGACATATTAGATACCGGGATCTTGCTGGTTATGTATATGGTAGAAAAGCGTATTCTCTGACATGGACTCTGCAGTATGTCAATCTTTTCATGATAAATACCGGCTACATCATTTTGGCTGGTTCGGCTTTGAAGGCCGTTTATGTTCTATTTAGGGATGATGATCAGATGAAGCTTCCACATTTTATTGCCATAGCTGGACTTGTATGTGCAATGTTTGCCATTTGTATTCCTCATCTTTCAGCTCTTGGAGTTTGGCTAGGATTTTCAACGGTCTTAAGCCTCGCATACATTGTCATAGCACTTGTACTGTCACTGAAAGATGGAATAAAAGCACCAGCTCGAGATTATAGTGTTCCGGGAACATCAACAAGTAAAATATTTACAACAATCGGGGCGTCTGCAAATCTTGTGTTCGCATATAATACAGGAATGCTTCCTGAGATACAGGCGACGATTCAACAACCAGTTGTCAAGAACATGATGAAAGCCCTATACTTTCAGTTTACCGTTGGAGTTCTACCATTATATCTGGTTACCTTTGCAGGGTACTGGGCATATGGATCTTCAACACAAACGTTTTTGCTGAATAATGTCAATGGTCCAATCTGGGTGAAGGCAGTGGCCAATATTACAGCCTTTCTTCAATCAGTCATTGCATTGCATATATTTGCAAGTCCAATGTATGAGTATTTGGATACCAAACATGGGATCAAAGGGAATGCTCTTGCTTTTAAGAACTTGTCATTTAGAATCTTGGTAAGAGGTGGCTACATGACTTTGAATACATTTGTATCAGCTCTTTTGCCATTCCTTGGAGATTTCATGAGCCTCACAGGAGCTATAAGCACATTTCCCCTTACATTTATTCTTGCAAACCATATGTACCTAGTGGCAAATAAGAACAAATTAACTTCCATTCAAAAGTTTTGGCATTGGATCAACATTTGGTTCTTTGCCATCATGTCTGTTGCAGCAACTATTGCAGCGCTGCGCCTTATTGCTTTAGATTCCAAAACTTATCATGTTTTCGCCGATTTATGA 1152 0.3941 MVPLGWIGGGVGLILATAISLYANALIAMLHEFGGTRHIRYRDLAGYVYGRKAYSLTWTLQYVNLFMINTGYIILAGSALKAVYVLFRDDDQMKLPHFIAIAGLVCAMFAICIPHLSALGVWLGFSTVLSLAYIVIALVLSLKDGIKAPARDYSVPGTSTSKIFTTIGASANLVFAYNTGMLPEIQATIQQPVVKNMMKALYFQFTVGVLPLYLVTFAGYWAYGSSTQTFLLNNVNGPIWVKAVANITAFLQSVIALHIFASPMYEYLDTKHGIKGNALAFKNLSFRILVRGGYMTLNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLVANKNKLTSIQKFWHWINIWFFAIMSVAATIAALRLIALDSKTYHVFADL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2488 383 PANTHER OS05G0424000 PROTEIN-RELATED 1 378 - -
Tpr4g2488 383 Pfam Transmembrane amino acid transporter protein 1 366 IPR013057 -
Tpr4g2488 383 PANTHER PROLINE TRANSPORTER 1 1 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2488 Tpr-Chr4 26610890 26615419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2488 1 383 Organic Solute Cotransporters AT2G39890 77.546 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2488 - - gmx:100500168 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2488 4 26610890 26615419 Tpr4g2488 4 26610890 26615419 ECH
Tpr7g0895 7 8030871 8034673 Tpr4g2488 4 26610890 26615419 PCT