Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2415 ATGGTTGATTTAGAATGGAAATCAAAGATGCTAAACTCAAACAACATATCACCAAAATCACCCAAACTGTCCTTACCCTTACCCACTTTACATCTTCCTCTTCCACTCTCACCAAACGACATCACAACAGCGTCGTTAAATATTTGCACCGCATACGAAAACTATCTCCGCCTCCCTAACCTAAAAACCCACTGGGCCACCAACACTTTCCCTAATTGGCCCAACGAGCCCGTCATAAAGCCCGCCTTAACCGCTCTCGAAATCACTTTCCGTTTCATCACAACCATTTTATCAGACCCAAGACCATACACCAACAAACGCGAATGGGCCCGGCGGGCCGAATCACTCACAAAAGCCCAAATCCACCTCATCGCTATTCTCTCCGAAGAAGAGGAAGAAAACCCAAACACACGTGGCAAAGCACCGGTAAATGACGTCATCAACATAAACAAAAATCAGTTTAGATGCTACAGTGAACAAAGCTTGCTACCAAAACTCGCCACGTGGCAGCAATCAAAGCAAATAGCGCAACGAATATTTTCCACCGTGGAATCTGAAATGATGACGTGTAGTTACACGTTAGGTTTAGGTGAACCGAATTTTAGCGGCAAATCGATTCTCCGTTACGACGACGTTTGTAAACCGAGTTTGATCCACTCCTTAGAAACGACGCCGTTTGATCATGTAACGAATTACGAGAATCGTAATCTACACGCGATTCACCAGATTTTCGAGTCATGGACACGCGCAGCGCGTGTATTAATGGAGCGTGTGAATGAGGATATAGATAACAGAGCATTTGAGAAAGCCGCGAGTGAGATCTACGCGGTGGAAAGAATCTGGAAACTTCTAATCGAAATTGAAGATTTACACATGATGATGGATCCAGAAGATTTTCTAAAACTAAAGAAGAAACTAGGAATGCGATCATGTAACGAAACGGTGCCGTTTTGTTTCCGATCAACGGAGTTAGTTACGATAACGAAGATGTGTAGAGATCTGAGACAAAAAGTACCGGAGATTTTGGAAGTTGAAGTGGACCCCACAGGTGGTCCCGGAGTAATGGAAGAAGCGATGAAGGTTTATTCGGAGAAGATGAATGGGTACGAGAAGGTTCATTTGTTGCAAGCGATGCAAGGGATTGAATCGGCGATGAAGAGATTTTTTTATGCGTATAAACAGGTTTTGACGGTTATGATGGGAAGTTCTGAAATGAATTTGGAATCGTTGAATCGGATTTTTCTTGAACCGACTTGGTTTCCTAGCTTGGATGCTGCTAAGACTTTTCTTGGGTATTTTTGGGAAAATTACGAAAATAGTACGATTAATTGGTAA 1335 0.43 MVDLEWKSKMLNSNNISPKSPKLSLPLPTLHLPLPLSPNDITTASLNICTAYENYLRLPNLKTHWATNTFPNWPNEPVIKPALTALEITFRFITTILSDPRPYTNKREWARRAESLTKAQIHLIAILSEEEEENPNTRGKAPVNDVININKNQFRCYSEQSLLPKLATWQQSKQIAQRIFSTVESEMMTCSYTLGLGEPNFSGKSILRYDDVCKPSLIHSLETTPFDHVTNYENRNLHAIHQIFESWTRAARVLMERVNEDIDNRAFEKAASEIYAVERIWKLLIEIEDLHMMMDPEDFLKLKKKLGMRSCNETVPFCFRSTELVTITKMCRDLRQKVPEILEVEVDPTGGPGVMEEAMKVYSEKMNGYEKVHLLQAMQGIESAMKRFFYAYKQVLTVMMGSSEMNLESLNRIFLEPTWFPSLDAAKTFLGYFWENYENSTINW* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2415 444 Pfam Hs1pro-1 N-terminus 1 184 IPR009869 GO:0006952
Tpr4g2415 444 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 444 IPR038759 -
Tpr4g2415 444 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 209 430 IPR037217 GO:0019441|GO:0020037|GO:0046872
Tpr4g2415 444 Pfam Hs1pro-1 protein C-terminus 187 436 IPR009743 -
Tpr4g2415 444 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 1 444 - -
Tpr4g2415 444 Gene3D - 219 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2415 Tpr-Chr4 25827997 25829646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2415 - - gmx:100778560 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2415 4 25827997 25829646 Tpr4g2415 4 25827997 25829646 ECH
Tpr7g0929 7 8478859 8481026 Tpr4g2415 4 25827997 25829646 PCT