Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2389 ATGGGGAGGTTATTTGTTGTCCATCTTGAAGGGAAGATCTATAGCTGTAAACACTGTAGAACCCCTCTTGCTGTTTTTGAAGATATTGTTTCCAAGGATTTCCAAAGCAGACATGGAAAAGCTTATCTCTTCCGTAAGGTTGTGAATGTTTCTATCGGAGAAGCAGATGACAGGCAGATGATCACTGGGATGCATACTGTGGCTGACATTTTCTGTGTTGGTTGTGGATCACATGTCGGTTGGACATATGTGACTGCTCATGAGAAAAGCCAGAAGTACAAAGAAGGAAAATCTGTTCTTGAACGGTTCAAAATGTCAGGTCCGGACAGCAACAATTATTGGGTTAGGCATGAAACACATGTTGGTGGAAGTGATGCAGATGATGCTTAA 390 0.4205 MGRLFVVHLEGKIYSCKHCRTPLAVFEDIVSKDFQSRHGKAYLFRKVVNVSIGEADDRQMITGMHTVADIFCVGCGSHVGWTYVTAHEKSQKYKEGKSVLERFKMSGPDSNNYWVRHETHVGGSDADDA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2389 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Tpr4g2389 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 129 IPR039058 -
Tpr4g2389 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 105 IPR004910 -
Tpr4g2389 129 PANTHER PROTEIN YIPPEE-LIKE 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2389 Tpr-Chr4 25454248 25457407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2389 - - pvy:116111775 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2389 4 25454248 25457407 Tpr4g2389 4 25454248 25457407 ECH
Tpr7g0936 7 8576871 8579438 Tpr4g2389 4 25454248 25457407 PCT