Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2374 ATGCAGCCATTTCGTCGCAAGACACCTCTTTTCAACTTAGAAACAGGAGTAGCAATGAAGGGTCGAAAAAACAACAATTTCTCCATTTTTGTAGTTGTTTTTTCCATTTTCCTCTTTGGGATTTTCATGTATAATGAAGACGTTAAATCCATAGCTGAATTCCCATTTTCTAGACCAAAAGTTCAACAAACCCATCAAGAAAAACCAAAAAAGATTGAGTCTTTACAAAAGGAAATTACAGAGAAAGTTGTTGTAGAAGAAGAAACAGAAAATGTTGTTGTTGATGATGATACTAAGAAAAATGCTGTGGAAGAAACTGTTACTGTTGTGACTACTAAGAATTCAAGAACTCAACTTGATAAAAGTGATGATGGTGATGATGATTCTGATGAACCACAAGAAGAACATGTTGAATTGAAAAAGATTGTTATGACAGAGAAAGAAGAGAAGATTGAATTGTTAGAAGAAGAGGAAGAAGATGATGAAGAAGTTGAATTGCCACCTAAAGATTGTGACTTGTTTAATGGTAAATGGGTTTTAGATAACTTGACACATCCTTTGTATAAAGAAGATGAATGTGAATTTCTTACTTCACAAGTTACTTGTATGAAGAATGGAAGAAAAGATTCTTTGTATCAGAATTGGAAATGGCAACCTAGAGATTGTTCTCTGCCAAAGTTTAAGCCAAGATTGTTGTTTAAGAAGATTAGAGGGAAGAGGGTAATGTTTGTTGGAGATTCTTTGAATAGAAATCAGTGGGAATCAATGGTTTGTATGGTTCAATCTGTTGTTACTTCGGATAAGAAGACTTGGTATAAGACTGGTTCTCTTGCAATATTGAAAATTGAGGAACCAGAGAACATAATTACTACTGTGGAATTCTACTGGTCACCATTTCTTGTAGAATCAAATTCAGATGATCCAAAAATGCACAGCATATTAGACCGTATAATCATGCCTGAATCAATTGAAAAACATGGAGTGAATTGGAAGGATGCAGATTATCTTATCTTTAACACCTACATATGGTGGATGAACACTTTCAACATGAAAGTCTTACGAGGATCATTTGATGAAGGGGCCACAGAATATGATGAAGTTCCTAGGCCAGTAGCATATGAGAGAGTAATGAAGACATGGTCAAAATGGGTTGATAACAACATTAATCCAAATAGAACCAAAGTTTTCTTCACTGGCACGTCCCCTCTTCATATCAAGAGTGAGGATTGGAACAACCCAGATGGTATAAAATGTGCTAAAGAAACAACTCCGGTTCTCAACATGTCGACTCCGTTGAATGTGGGCACAGATCGTCGGCTTTTCGTCATTGCAAACAATGTGACAAACTCAATGAAGGTGCCAGTGTACTTCATTAACATCACAACCTTATCAGAGTATAGAAAAGATGCACATACCTCGGTTTACACCATACGTCAAGGAAAGATGCTAACACCTGAACAACAAGCTGATCCAACTAATTATGCAGATTGTATTCATTGGTGTTTACCAGGATTACCAGACATTTGGAATGAGTTCCTTTATGCACAAATCATCTCTCAATCTTGA 1566 0.3595 MQPFRRKTPLFNLETGVAMKGRKNNNFSIFVVVFSIFLFGIFMYNEDVKSIAEFPFSRPKVQQTHQEKPKKIESLQKEITEKVVVEEETENVVVDDDTKKNAVEETVTVVTTKNSRTQLDKSDDGDDDSDEPQEEHVELKKIVMTEKEEKIELLEEEEEDDEEVELPPKDCDLFNGKWVLDNLTHPLYKEDECEFLTSQVTCMKNGRKDSLYQNWKWQPRDCSLPKFKPRLLFKKIRGKRVMFVGDSLNRNQWESMVCMVQSVVTSDKKTWYKTGSLAILKIEEPENIITTVEFYWSPFLVESNSDDPKMHSILDRIIMPESIEKHGVNWKDADYLIFNTYIWWMNTFNMKVLRGSFDEGATEYDEVPRPVAYERVMKTWSKWVDNNINPNRTKVFFTGTSPLHIKSEDWNNPDGIKCAKETTPVLNMSTPLNVGTDRRLFVIANNVTNSMKVPVYFINITTLSEYRKDAHTSVYTIRQGKMLTPEQQADPTNYADCIHWCLPGLPDIWNEFLYAQIISQS* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2374 521 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 14 519 IPR029962 GO:0016413
Tpr4g2374 521 Coils Coil 137 164 - -
Tpr4g2374 521 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 224 515 IPR026057 GO:0016740
Tpr4g2374 521 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 14 519 - -
Tpr4g2374 521 MobiDBLite consensus disorder prediction 113 136 - -
Tpr4g2374 521 Pfam PMR5 N terminal Domain 169 222 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2374 Tpr-Chr4 25205541 25209383 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2374 - - gmx:100789919 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0965 7 8907480 8910936 Tpr4g2374 4 25205541 25209383 ECH
Tpr4g2374 4 25205541 25209383 Tpr4g2374 4 25205541 25209383 ECH