Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2347 ATGCAAATAATGAAGCATCCAATGTCACCTTCATCCATTCTAAGAAGCAAAATTCGGTTCTCCCCTTACCTTTTCACCCTTCTAGCTTTCATCATCTTTGTTACTATCCTCTATGGTGAAGATTTCATGTGCATCTTTGGTCAACAACTCCAAAACTACTCTAACCAAGACAAACTCTACTCCACAAATGAGAGGGTGAAGAAGCAGATCAAAGTACCGTTTGCCGTGGGTAAAACAGAGGAAGGGTGTGATATATTTAGTGGAAGATGGGTTTGGGACGAGGTTGCTCGACCATTGTACGAGGAATCAGATTGTCCGTACATACAACCACAATTGACTTGCCAAGAACATGGGAGGCCCGACAAAGATTACCAGCATTGGAGGTGGCAGCCACACGGTTGTGATCTTCCTAAATTCAATGCAAGTTTGATGCTTGAAACACTTCGTGGAAAGAGGATGATGTTTGTTGGAGATTCTCTCAATCGTGGTCAATATGTTTCTTTTGTATGCCTTCTTCATCAACTCATTCCTGAAGATGCCAAATCCATGGAAACCTTTGATTCACTCACTGTATTCACTGCTAAGGAATACAATGCAACAATAGAGTTCTATTGGGCACCATTTCTACTAGAATCAAACTCGGACAATGCTGTTGTTCATAGAATATCTGATAGGATTGTAAGAAAAGGTTCAATCAATAAGCATGGTAGAAATTGGAAAGGTGCTGACATTTTAGTATTCAACACATATCTTTGGTGGATGACTGGCTTGGAGATGAAGATCTTACTTGGATCTTTTGATGATGAAGTAAAAGAGATTGTCACAGTTTCAACTGAGGATGCTTATCGTATGGCTATGAAAAGTATGCTTAGATGGGTGAGGTTGAACATGAATCCAAAGAAAACTAGAGTCTTTTTCACTAGCATGTCACCTTCACATGGAAAGAGCATAGATTGGGGAGGTGAACCAGGAGGAAATTGTTACAATGAAAAAACATTGATTAATAATTCCACATATTGGGGTTCAGACTGTAGAAAAAGTATAATGCAAGTGATTGGTGAAGTTTTAAGCAAAACAAAAGTTCCAGTTACATTTCTTAACATCACACAACTCTCAAGTTACCGTAAAGATGCACACACTTCAATCTATAAGAAGCAATGGAACCCTTTAACTCAAGAACAATTAGCTAACCCTGTTAGCTATGCTGATTGTGTACATTGGTGTTTACCTGGTCTTCAAGATAATTGGAATGAACTTTTGTTTGCTAAGTTGTTTTATCCTTGA 1284 0.3863 MQIMKHPMSPSSILRSKIRFSPYLFTLLAFIIFVTILYGEDFMCIFGQQLQNYSNQDKLYSTNERVKKQIKVPFAVGKTEEGCDIFSGRWVWDEVARPLYEESDCPYIQPQLTCQEHGRPDKDYQHWRWQPHGCDLPKFNASLMLETLRGKRMMFVGDSLNRGQYVSFVCLLHQLIPEDAKSMETFDSLTVFTAKEYNATIEFYWAPFLLESNSDNAVVHRISDRIVRKGSINKHGRNWKGADILVFNTYLWWMTGLEMKILLGSFDDEVKEIVTVSTEDAYRMAMKSMLRWVRLNMNPKKTRVFFTSMSPSHGKSIDWGGEPGGNCYNEKTLINNSTYWGSDCRKSIMQVIGEVLSKTKVPVTFLNITQLSSYRKDAHTSIYKKQWNPLTQEQLANPVSYADCVHWCLPGLQDNWNELLFAKLFYP* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2347 427 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 136 422 IPR026057 GO:0016740
Tpr4g2347 427 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 12 427 IPR029962 GO:0016413
Tpr4g2347 427 Pfam PMR5 N terminal Domain 82 135 IPR025846 -
Tpr4g2347 427 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 12 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2347 Tpr-Chr4 24857196 24861423 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2347 - - gmx:100785571 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2347 4 24857196 24861423 Tpr4g2347 4 24857196 24861423 ECH
Tpr7g0991 7 9263500 9269146 Tpr4g2347 4 24857196 24861423 PCT