Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2345 ATGCCTTCACCTATTCAGCTTCAAAGATTCAACACTAACACCGAAACAGCCTCCGTTAATTTCATAGCTAACGGCGTTAACTGTCCAAAACAAATCCAACAAACGCGTCGTTACGCGCTTTCAACGGAAAAAATAACCGTTTCCGATACGGTTGCGAATCACCACACACACGTGGTGGGACCACACCAGTGTTACTCCGTCGTGATCCAAACCATCAACGCCTCCGTTTCAACCGTTTGGTCCGTCGTTAGACGATTTGATAATCCACAAGGATACAAAAACTTTGTGAAAAGCTGCAACGTCGTCGCCGGCGATGGCATTCGTGTCGGTGCTCTCCGTGAAGTCCGGTTGGTTTCCGGTTTACCTGCTGTTTCGAGTACGGAGCGGTTAGATATACTTGATGAAGAACGCCATGTCATCAGTTTCAGTGTTGTTGGTGGTGTTCATCGGTGTAGGAATTATCGATCGGTGACGACGCTTCACGGTGACGGTAATGGAGGAACGGTTGTTATTGAATCTTATGTTGTTGATGTACCGTGTGGTAACACAAAGGAAGAAACGTGTAGTTTTGTTGATACCATTGTTCGGTGTAATTTGCAGTCACTTGCTCAAATCGCTGAAAAACTCTGA 630 0.4603 MPSPIQLQRFNTNTETASVNFIANGVNCPKQIQQTRRYALSTEKITVSDTVANHHTHVVGPHQCYSVVIQTINASVSTVWSVVRRFDNPQGYKNFVKSCNVVAGDGIRVGALREVRLVSGLPAVSSTERLDILDEERHVISFSVVGGVHRCRNYRSVTTLHGDGNGGTVVIESYVVDVPCGNTKEETCSFVDTIVRCNLQSLAQIAEKL* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2345 209 Pfam Polyketide cyclase / dehydrase and lipid transport 70 207 IPR019587 -
Tpr4g2345 209 PANTHER - 30 208 - -
Tpr4g2345 209 CDD PYR_PYL_RCAR_like 64 207 - -
Tpr4g2345 209 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 30 208 - -
Tpr4g2345 209 SUPERFAMILY Bet v1-like 66 206 - -
Tpr4g2345 209 Gene3D - 27 209 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2345 Tpr-Chr4 24846687 24848060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2345 K14496 - gmx:100798803 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0992 7 9274051 9275526 Tpr4g2345 4 24846687 24848060 ECH
Tpr6g1881 6 20289982 20291010 Tpr4g2345 4 24846687 24848060 ECH
Tpr4g0676 4 6244421 6245539 Tpr4g2345 4 24846687 24848060 ECH
Tpr4g2345 4 24846687 24848060 Tpr4g2345 4 24846687 24848060 ECH
Tpr7g0992 7 9274051 9275526 Tpr4g2345 4 24846687 24848060 PCT