Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2314 ATGGCGGAGAAGGTGATGATGGAAGAAGAAGATTCATTGGAAAACGGAACCGGGTCGGGTCATGGAATAAGAAGAGTTAGTTCGAGAGCTGAAGTTGATACGTCAATGCCGTTTGAGTCTGTTAAGGAAGCGGTTACCCGTTTTGGTGGAAGTGGACCTTGGTTACCTCTCTATAGGCTTGGTGAAGCTTATACCAGTATTGAAGACTTCGACATAAAGAAAATCGAGGAACAAGCAGCGAAGTTGGAAAAGGATTTGATAATGAAAGAACTGGAAACACTTGATGTGCTTGAAGAACTAGGATCTGCTAAAACGATTCTCGAGAAACTAAAGCAGCAACTACAATCCGAAGCACTGAAATGTTGTGCAACTCAAGATGTGAATTCATGTGAACAGATTAAAGCCCCTGTTAAAAATTATGAAAACAATGTCAACCATCGAGAACCAATATTGCAAAGTCCAATCCCCTGCGCTGCTTCATCGCCTGATATGTTCTTAACCGAATTAAAAGAAGCTAAGAGGAACCTTGGTAAAACTATAACTGATCTCGGGACAATACAATCTTCTGTCGAAACTTTGAATAAAAAGATGAAGAAGGAGAGACTTTTTCTCGAGAGGACACGAGAGAATCTACATTCAAAGTTTGCAGCTATCTCGGCTCAAAATGTGGCTAAAAAAGAAACCTCAAAGCCACCAGAATCTCCTGTAGAAAAGGATTTTACTTTTGACATTCCACAAAATGTTGCGAGGGATTTCAAGTTAGATGTTGAACAGTACAATGGAATGGTTGAATCAAGATCCACAGAAGTTTCGAAGCAAGGGATTGAGTATGGAGAGAATGAGTTTAGTATTAAGAATGCTGAGATGAGGTGGTTTGCAGCTAAAAAGATGGAAGAAGCCGCAATGGCAGCCGAAGCGGTAGCTCTTGCTGAAATCAAGGCTCTTTCTGGTGTTGATATTTCATCGCGATTTTCTACACGAGAACATCAGAAAGTGACTTCTGCATTAGAGATGTACTCTACTCTAAATCCCGAATTTCAAATGCATGAAGAGTCTATCTTGAAGAAAATAATACATGCCAATTTCAAAATCAATGAAGCAAGTGCTTCTAAGCTAACTATTCTGAAAAAATTAGAGGAAGCAACCGATGAAGTTCAGCGTAGCAAACAAATTTTAACAGAAGCTTTAAACGGTATTGAAAATGCAAACAGAAAGCAACGTGCTGCTGAAGAGGCTCTAAGAAGATGGATTCCTGAAAACAATGTAAAGGGTCGGGCTATGCACAACTCAATTAAGCGAAACAAGTTCAATGTAGTTCAAAATCGTCAAGCTTCCAAGCCTGCCGTAAGGTCCTCAGTTTCAATGAGAGATCTACTTAGCAGAAAGCAGGTTACTGACGAATATACTATAACAAAAGAGATGGAAGAGCATGCGGAAACCAAGGTAGCGTTGAGTCAAATGCTTCGATCATTGAAGGAAAATCAAACTCTTCCAACTGAACATGAGAATGACGGGAGCGATCAAAAGCAGTCTGTAGCTCAGAGGAAGATGTTTGGATTCATCCGAATATCATTCCCCTTGGGAAAGCGAAATGATAAAAAGACATGA 1608 0.4005 MAEKVMMEEEDSLENGTGSGHGIRRVSSRAEVDTSMPFESVKEAVTRFGGSGPWLPLYRLGEAYTSIEDFDIKKIEEQAAKLEKDLIMKELETLDVLEELGSAKTILEKLKQQLQSEALKCCATQDVNSCEQIKAPVKNYENNVNHREPILQSPIPCAASSPDMFLTELKEAKRNLGKTITDLGTIQSSVETLNKKMKKERLFLERTRENLHSKFAAISAQNVAKKETSKPPESPVEKDFTFDIPQNVARDFKLDVEQYNGMVESRSTEVSKQGIEYGENEFSIKNAEMRWFAAKKMEEAAMAAEAVALAEIKALSGVDISSRFSTREHQKVTSALEMYSTLNPEFQMHEESILKKIIHANFKINEASASKLTILKKLEEATDEVQRSKQILTEALNGIENANRKQRAAEEALRRWIPENNVKGRAMHNSIKRNKFNVVQNRQASKPAVRSSVSMRDLLSRKQVTDEYTITKEMEEHAETKVALSQMLRSLKENQTLPTEHENDGSDQKQSVAQRKMFGFIRISFPLGKRNDKKT* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2314 535 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 16 534 - -
Tpr4g2314 535 Coils Coil 194 214 - -
Tpr4g2314 535 MobiDBLite consensus disorder prediction 1 15 - -
Tpr4g2314 535 MobiDBLite consensus disorder prediction 1 31 - -
Tpr4g2314 535 Pfam Weak chloroplast movement under blue light 167 420 IPR008545 -
Tpr4g2314 535 Pfam Weak chloroplast movement under blue light 30 148 IPR008545 -
Tpr4g2314 535 Coils Coil 474 494 - -
Tpr4g2314 535 Coils Coil 72 92 - -
Tpr4g2314 535 PANTHER WEB FAMILY PLANT PROTEIN 16 534 - -
Tpr4g2314 535 Coils Coil 375 412 - -
Tpr4g2314 535 Coils Coil 97 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2314 Tpr-Chr4 24460295 24464036 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2314 - - cam:101496164 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1033 7 9830851 9834493 Tpr4g2314 4 24460295 24464036 ECH
Tpr4g2314 4 24460295 24464036 Tpr4g2314 4 24460295 24464036 ECH
Tpr7g1033 7 9830851 9834493 Tpr4g2314 4 24460295 24464036 PCT