Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1947 ATGGAGAATCAAAGTTCCGTAGCACTAGTCGTCGGAGTAACCGGAATGGCTGGTCTAAGCCTAGCCGAAGCCTTAAAGCAGCCCGATTCTCTCGGAGCACCATGGAAAGTTTACGGCGCAGCTCGCCGCTCCCCCGACGACTGGTTCCCTTCGTCTATCCTTGACGGCTTCATAACCTTCGACGCCGTCAACTCAGCCGACACACACGCCAAGCTATCACCCATAGCCCACGAAATCACCCACCTCTTCTGGGTCACATTCCAGTTTAACGCCGACGAAGATATTAACATCTCCGTTAACAAAACCATGCTTCTTAACGTTCTCAACGCTCTCAAATCTTCACCGTTATCCCCTCTCAAACATATAACACTCCAAACCGGAACAAAACATTACATGGGTCCGGTTCAAGATCCGGTCCAGTCCACCCAACTAATCACACACGAACCGCCATTTAACGAAAACATGCCACGACTACCTTACCCGAATTTCTACTACGCGCTTGAAGATCTTGTTGCTTCATACGCGCCTAAAATAACATACTCAATCCACCGTTCCTCTATCATAATAGGCGCGTCGGTGAGAAGTGCACACAACGCGCTTATGATGTTAGCAGCATACGCTGCCATATGTCGCCACGTGGGATTACCGTTTCGTTACCCGGGAAATAAGTACACGTGGCATCATTTCTGTGATATGACGGATGCGCACGTGTTAGCAAAGCAACACGTGTGGGCTGCGGTTACAGAGAAAGCGAAGAATGAAGCGTTTAATTGTACAAACGGTGATGTTTTCAGTTGGAAGAGTGTGTGGAAGTTGTTGAGTGAGGTTTTTGATGTTGCGTTTGTGGAATTTTATGAGAATGATGAGTTTGATTTGGTTAAATTAATGAGTGATAAGGGTGAGGTTTGGGATTTAATTGTGGAGAAATATGGGCTTCATAAGACCAAATTGAAGGAAATTGCTTGTTATGAAGCTATGGTCCCAGTTGTAAGATTTGAGTTTCAACATGTGTCTAGTATGAATAAGAGTAAGGATTTTGGGTTTTCTGAGTATGTTGATACGTTTAAGAGTATTAGATTCTGGTTGGCTAAGCTCAGGGAGATGAAACTCATACCCTCCTACTGA 1125 0.4533 MENQSSVALVVGVTGMAGLSLAEALKQPDSLGAPWKVYGAARRSPDDWFPSSILDGFITFDAVNSADTHAKLSPIAHEITHLFWVTFQFNADEDINISVNKTMLLNVLNALKSSPLSPLKHITLQTGTKHYMGPVQDPVQSTQLITHEPPFNENMPRLPYPNFYYALEDLVASYAPKITYSIHRSSIIIGASVRSAHNALMMLAAYAAICRHVGLPFRYPGNKYTWHHFCDMTDAHVLAKQHVWAAVTEKAKNEAFNCTNGDVFSWKSVWKLLSEVFDVAFVEFYENDEFDLVKLMSDKGEVWDLIVEKYGLHKTKLKEIACYEAMVPVVRFEFQHVSSMNKSKDFGFSEYVDTFKSIRFWLAKLREMKLIPSY* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1947 374 CDD 5beta-POR_like_SDR_a 7 311 - -
Tpr4g1947 374 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE-LIKE 2 372 - -
Tpr4g1947 374 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 285 IPR036291 -
Tpr4g1947 374 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 2 372 - -
Tpr4g1947 374 Pfam NAD dependent epimerase/dehydratase family 8 248 IPR001509 -
Tpr4g1947 374 Gene3D - 5 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1947 Tpr-Chr4 20264606 20266502 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1947 - - gmx:100812240 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1947 4 20264606 20266502 Tpr4g1947 4 20264606 20266502 ECH