Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1945 ATGATGGTTAGGAAACAGGACATAGATGAACTTCCAAAGAACGCGGCTAACTACACAGCTTTAACACCTTTATGGTTCTTAGAAAGAGCTGCTAAGATTCATCCAACCAGAAAATCAATCATCCATGGATCCCTTCATTACACGTGGCATCAGACTTATCAACGTTGCCGTCGATTCGCTTCCGCTCTTTCTAACCACTCCATCTCTCTCGGACACACTGTAGCTGTTATTGCGCCAAATATTCCAGCTCTCTATGAAGCTCATTTTGGGATTCCAATGGCAGGGGCAGTGTTGAACCCTGTGAACATAAGGCTGAATGCTTCCACGGTAGCTTTTCTTCTTGGTCATTGCAATGCATCAGTTGTAATTGTGGATCAAGAGTTCTTTTCATTGGCAGAAGAAGCTTTGAAAATATGGTCTGACAAAACCAAAACATTTAAGTCTCCGATTTTAATTGTCATTGGCGATGAAAACTGCGACCCTGAGTCACTTAGATATGCGTTGAGCAAAGGAGCCATTGATTATGAGGACTTTCTTCGAAGTGGTGACCCTGAATATGATTGGAAACCACCAGAGGATGAGTGGCAGAGCATTGCTTTGGGTTACACGTCTGGGACCACTGCTAGTCCGAAAGGCGTGGTTTTGCATCACCGTGGAGCGTATCTCATGTCTCTTAGTGGTGCACTTATTTGGGGAATGAATGAAGGAGCTGTATATCTTTGGACTCTACCCATGTTTCATTGCAATGGTTGGTGCTACACTTGGACACTGGCAGCTCTCTTTGGCACAAACATATGTCTCCGCCAGGTATCAGCAAAGGCAGTATATGAAGCCATTGCCAAGTACAAAGTGACTCATTTTTGTGCAGCACCAGTGGTGCTTAACTCAATAATTAATGCTCCAGCTGAGGAAACCATACTTCCTCTACCTCATGTTGTACATGTGAATACTGCTGGTGCTGCTCCTCCTCCTTCTGTGCTTTCCGGCATGTCTGAACGAGGATTTCGTGTCACACACACTTACGGTCTTTCAGAAACCTTTGGCCCATCCGTCTATTGTGCTTGGAAACCAGAGTGGGACTCACTTCCACCAGAATCCAGAGCCCGACTCCATGCAAGACAAGGGGTTAGGTACATTGCTTTGGAAGGCCTGGACGTAGTAAACACGAAAACCATGCAGCCTGTTCCTGCTGATGGCAAAACTGTTGGTGAGATCGTGATGCGTGGTAATGCCGTGATGAAAGGTTACTTAAAGAATCCTAAAGCTAATGAAGAGAGCTTTGCAAATGGATGGTACCATTCCGGCGATCTTGCTGTAAAGCATCCAGATGGATATATAGAAATTAAAGACAGATCAAAGGACATCATCATCTCGGGTGCTGAAAATATCAGCAGTGTAGAGGTAGAGAATGCTCTGTACTCGCATCCTGCGATACTGGAGACATCGGTTGTTGCAAGGCCAGATGAGAAATGGGGTGAGTCTCCGTGTGCGTTTGTGACATTAAAGCCAGGAGTGGATAGTAGTAACGAGCAGCGTCTAGTTGATGATATACTGAAATTCTGCAAGGCCAAGATGCCTGCTTATTGGGTTCCGAAATCGGTTGTCTTTGGACCATTACCTAAGACAGCTACTGGGAAGGTACAGAAGCATCTGCTGAGGGCCAAGGCAAAGGAAATGGGGCCTGTCAAGAATAAGATGAGCAAGTTGTAA 1710 0.4544 MMVRKQDIDELPKNAANYTALTPLWFLERAAKIHPTRKSIIHGSLHYTWHQTYQRCRRFASALSNHSISLGHTVAVIAPNIPALYEAHFGIPMAGAVLNPVNIRLNASTVAFLLGHCNASVVIVDQEFFSLAEEALKIWSDKTKTFKSPILIVIGDENCDPESLRYALSKGAIDYEDFLRSGDPEYDWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMNEGAVYLWTLPMFHCNGWCYTWTLAALFGTNICLRQVSAKAVYEAIAKYKVTHFCAAPVVLNSIINAPAEETILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGLSETFGPSVYCAWKPEWDSLPPESRARLHARQGVRYIALEGLDVVNTKTMQPVPADGKTVGEIVMRGNAVMKGYLKNPKANEESFANGWYHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEVENALYSHPAILETSVVARPDEKWGESPCAFVTLKPGVDSSNEQRLVDDILKFCKAKMPAYWVPKSVVFGPLPKTATGKVQKHLLRAKAKEMGPVKNKMSKL* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1945 569 CDD ttLC_FACS_AEE21_like 18 554 - -
Tpr4g1945 569 PANTHER ACYL-ACTIVATING ENZYME 6 564 - -
Tpr4g1945 569 SUPERFAMILY Acetyl-CoA synthetase-like 14 558 - -
Tpr4g1945 569 Pfam AMP-binding enzyme C-terminal domain 467 546 IPR025110 -
Tpr4g1945 569 Pfam AMP-binding enzyme 27 458 IPR000873 -
Tpr4g1945 569 Gene3D - 6 453 IPR042099 -
Tpr4g1945 569 PANTHER DEPENDENT LIGASE, PUTATIVE-RELATED 6 564 - -
Tpr4g1945 569 Gene3D - 454 561 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1945 Tpr-Chr4 20253253 20256904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1945 6 562 Miscellaneous Gene Families AT3G16910 75.090 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1945 K01913 - gmx:100808187 1058.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1945 4 20253253 20256904 Tpr4g1945 4 20253253 20256904 ECH