Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1930 ATGTCCAGGCTTGCAATTGATTCCATTATGACGAGAAAAAGAAGTAATGTGTCACGAAAACCTAGGGCAAATACTGATGCAATATTTCAGAATTACTTTGGATTGTTACCACATGCTGAGAAAGAGAATGTGAGAGATGCAGTAGTTGTTTCTGATGGATTAGGAACTACTAACAAGCTCAAGAAGCTAAAGCTTAAGTTTGGGGGTGTTACTCATACTATTCATACCAAGTCTAAGTCTGGAAATTCCGATGCTCGTAACCCTAAGGACAATGCAGATAATAACGATGTCCGTTCTTTTGATAAGAGAGAGGTTGGGGACAAATTGGGTAAGCTCCCAAGAACTGAATCTTCTTTTGCATCTGAGAGTCATTCACATAAAAGAAAGGCAACTGGACAGCATTCCCGTAAGAGTAAGCGGGCCAATGAGAGGCGTGCCTTGGGTGTGGGATTTAGTGATGAAGAGGATGAAGATGCAGAACTTCATTTTCTTGAAAAAATCAGTTCATCAAAAAGAGCAATTAGTCGCCATAACAATAATCAAGGAGGCTTAGCAATGCGTGGCATTGGTGAGGATCAGGACTATGTGGAAGAAGACCGAACATCAAGTGACGAGTCAATATTAGAGGGGAAGAAGTCAAAGAGCGAATCTGTTAATTTACTTGTACCAAGAAAGCAATCCACACGCAACAATCGTAATGGTTCACTTGATTCTTTCAAAGACGTGTTATCTGGTCCAGTTGCAAGCTTTATTGACATCCCAGATAAAAAGGGCAAATTATCAGAGGAGCAGCTAATCAAGAAAGCTGAGGCTGCAAAAAGACGGAAAATTCAATCGGAGAAGGCAGCTAAGGAGGCTGAGGAGGCGGCCATTAAGAAGATACTCGGTCAAGATTCTGCTAAGAAGAAGAAAGAGGAAAAGATGAATAAGCGCAGGGATGAAATGGCCAAGGAAAAATGTAGCAAACCCTTCAATCTAGCATTGAACACTGTTCGATGGACTATGGGTCCCAATGGAACCGTAGTAACTTTTTCAGAAGATATTGGTCTACCAAGTATCTTCCAAACAATACCTAACAGTTATCCTCCCCCAAGAGAAAGGTGTGCAGGTCCAAACTGCACTAATGCTTACAAGTATCGGGATTCCAAGTCAAAGCTTCCCCTTTGCAGTCTTGGTTGTTACAAAGCAATTCATGAAAAAATCTCACCTGTGCTTGCATGTTAG 1224 0.4142 MSRLAIDSIMTRKRSNVSRKPRANTDAIFQNYFGLLPHAEKENVRDAVVVSDGLGTTNKLKKLKLKFGGVTHTIHTKSKSGNSDARNPKDNADNNDVRSFDKREVGDKLGKLPRTESSFASESHSHKRKATGQHSRKSKRANERRALGVGFSDEEDEDAELHFLEKISSSKRAISRHNNNQGGLAMRGIGEDQDYVEEDRTSSDESILEGKKSKSESVNLLVPRKQSTRNNRNGSLDSFKDVLSGPVASFIDIPDKKGKLSEEQLIKKAEAAKRRKIQSEKAAKEAEEAAIKKILGQDSAKKKKEEKMNKRRDEMAKEKCSKPFNLALNTVRWTMGPNGTVVTFSEDIGLPSIFQTIPNSYPPPRERCAGPNCTNAYKYRDSKSKLPLCSLGCYKAIHEKISPVLAC* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1930 407 MobiDBLite consensus disorder prediction 191 212 - -
Tpr4g1930 407 PANTHER INO80 COMPLEX SUBUNIT B 8 407 IPR029523 GO:0006338|GO:0031011
Tpr4g1930 407 Pfam HIT zinc finger 364 395 IPR007529 -
Tpr4g1930 407 SMART PAPA_1_2 263 348 IPR006880 GO:0031011
Tpr4g1930 407 MobiDBLite consensus disorder prediction 74 149 - -
Tpr4g1930 407 Coils Coil 269 289 - -
Tpr4g1930 407 MobiDBLite consensus disorder prediction 82 111 - -
Tpr4g1930 407 PANTHER PAPA-1-LIKE FAMILY PROTEIN / ZINC FINGER (HIT TYPE) FAMILY PROTEIN 8 407 - -
Tpr4g1930 407 MobiDBLite consensus disorder prediction 219 233 - -
Tpr4g1930 407 Pfam PAPA-1-like conserved region 263 347 IPR006880 GO:0031011
Tpr4g1930 407 MobiDBLite consensus disorder prediction 178 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1930 Tpr-Chr4 20157441 20161441 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1930 - - cam:101504308 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1930 4 20157441 20161441 Tpr4g1930 4 20157441 20161441 ECH