Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1921 ATGGGGAACAATTTGAAAAGGGTTACTATTGTTGATATTCAGCTTCTGGTTTTCATAGTCTTAGTCTTGTTTAGGATTTCAACTTCAGAAAATCTACCAGCAAATTTTGTATTTGGAGATTCTCTTGTTGATGTAGGAAACAACAATTACATAATTTCTCTCTCAAAGGCTAATTTTTTGCCTAATGGTATTGATTTCGGAAGACCAACAGGAAGATTCACCAATGGAAGAACCATAGTTGATATCATTGGTCAGGAATTGGGTTTTGGCTTCACCCCGCCTTATTTGGCACCTACAACAAGTGGACCGGTGATTTTGAGGGGTGTCAACTATGCCTCTGGTGGGGGTGGAATTCTCAATTCCACTGGACAAGTCTTTGGTGGTCGACTCAACATGGATGCCCAGATAGATAATTTTGCGAATACTAGACATGACATAATTTCCTACATAGGTGTTCCCGTGGCTCTCAATCTATTCCAAAAGGCATTGTTTTCGGTCACAATTGGTTCAAATGATTTCATTAATAACTACTTGACACCAGAAGTCACATTTTCTGAGTACAAAATAGATTCTCCAGAACTCTTTGTGAGCACCATGATATCAAAACTCAGAACACAACTCACTAGGTTATTTAATCTAGGAGCTAGAAAAATTGTTGTAGCAAATGTGGGGCCAATTGGGTGCATACCAAATCAGAGGGATTCACATCCAGCTGAAGGAGATAATTGTGTCACTTTCCCTAATCAACTAGCTTATTTATTTAACACACAATTAAAGGGTCTAATTGCAGAACTCAACTCAAATTTAGTTGGTTCAATATTTGTATATGCAGACATCTACCATATTCTAGGAGACATACTCTTAAATTATGCATCATTTGGTTTTGATGATCCTTCTTCTGCTTGTTGCAACATGGCTGGGAGATTTGGAGGTTTGATCCCTTGTGGTCCTACCTCAAAAGTTTGTTGGGATAGATCAAAATATGTGTTTTGGGACCCTTATCATCCTTCTGATGCTGCAAATGTTGTCATCGCCAAGCGCCTCCTAGACGGTGGTTCAACTGATATTTCGCCGATGAACATTCGCCGACTCTTTCGATCTTAA 1104 0.3904 MGNNLKRVTIVDIQLLVFIVLVLFRISTSENLPANFVFGDSLVDVGNNNYIISLSKANFLPNGIDFGRPTGRFTNGRTIVDIIGQELGFGFTPPYLAPTTSGPVILRGVNYASGGGGILNSTGQVFGGRLNMDAQIDNFANTRHDIISYIGVPVALNLFQKALFSVTIGSNDFINNYLTPEVTFSEYKIDSPELFVSTMISKLRTQLTRLFNLGARKIVVANVGPIGCIPNQRDSHPAEGDNCVTFPNQLAYLFNTQLKGLIAELNSNLVGSIFVYADIYHILGDILLNYASFGFDDPSSACCNMAGRFGGLIPCGPTSKVCWDRSKYVFWDPYHPSDAANVVIAKRLLDGGSTDISPMNIRRLFRS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1921 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 19 365 - -
Tpr4g1921 367 SUPERFAMILY SGNH hydrolase 106 350 - -
Tpr4g1921 367 Pfam GDSL-like Lipase/Acylhydrolase 36 347 IPR001087 GO:0016788
Tpr4g1921 367 Gene3D SGNH hydrolase 24 352 IPR036514 -
Tpr4g1921 367 CDD SGNH_plant_lipase_like 33 351 IPR035669 -
Tpr4g1921 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 19 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1921 Tpr-Chr4 20076865 20078508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1921 32 367 Acyl Lipid Metabolism Gene Families AT4G10950 34.808 1.61e-69 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1921 - - gmx:100791871 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1921 4 20076865 20078508 Tpr4g1921 4 20076865 20078508 ECH