Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1903 ATGACAAATTTTAAGCCATTAGCATTAACTATCATCTTCTGCTTTTTTGTTTCAAGTCACTGCACAATTATCATCCCAAAAAACAACAATGGAAATTTGATTCAACAAACTTGCAAACAAACTCCAAATTATGCAATTTGCATTCAGTACCTCAAATCTGATCCAAGAAGTTCTGATGCAGATATAACAGGTCTAGCACTAATCATGGTGGATATAATCAAATCCAAAGCAAACACTACCTTAAACAAAATCAATCAACTGATTAAGAAGAAACAAGAACCTAGTCAAAAGGAAGCTTTGAATTCATGTGCTGGTAGATACAAAGCAATTTTGGTAGCTGATGTGCCAAAATCTGTTGCAGCTTTGAAACAAGGGGATCCTAAATTTGCTGAAGATGGTTCAAATGATGCTGCAGTTGAAGCAACTACTTGTGAGAATGGCTTCAAAGGAAAATCACCACTCTCTAATGAGAATATTGCTATGCATGATGTAGCAGCTATAACAGCAGCTATTGTTAAACAATTGCTCTAG 531 0.3522 MTNFKPLALTIIFCFFVSSHCTIIIPKNNNGNLIQQTCKQTPNYAICIQYLKSDPRSSDADITGLALIMVDIIKSKANTTLNKINQLIKKKQEPSQKEALNSCAGRYKAILVADVPKSVAALKQGDPKFAEDGSNDAAVEATTCENGFKGKSPLSNENIAMHDVAAITAAIVKQLL* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1903 176 SMART PMEI_2 29 171 IPR006501 GO:0004857
Tpr4g1903 176 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 176 - -
Tpr4g1903 176 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 12 176 - -
Tpr4g1903 176 CDD CIF_like 32 175 IPR034087 GO:0004857|GO:0043086
Tpr4g1903 176 Pfam Plant invertase/pectin methylesterase inhibitor 32 171 IPR006501 GO:0004857
Tpr4g1903 176 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 176 IPR035513 -
Tpr4g1903 176 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 175 IPR006501 GO:0004857
Tpr4g1903 176 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 175 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1903 Tpr-Chr4 19948792 19949558 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1903 - - mtr:MTR_4g122760 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1903 4 19948792 19949558 Tpr4g1903 4 19948792 19949558 ECH