Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1900 ATGACAACAAATTTTAAGCCTCTAACACTTTGCTTATGCCTTCAAGCTATTTTTCTCATAATTTCAATACCAACAACTCACTCTAGAACCACTTTCCTAGCAAAAGATGAAAAACTATCACTTATACAAAACACTTGCAAAAAAACACCAAATTACAATATTTGCCTTCAATCTCTGAAGGCAAATTCCGCTAGCTCTGTTTCTGATGTAACAGGGCTAGCTCAAATCATGGTGAAAGTGATGAAAGCGAAAGCAAATGATGGATTAAATAAGATCCATCAGCTACAAAAGTTGGGAAATGGAGCTAGGAAAGCCTTGAATTCTTGTGGTGACAAATACAGAGCAATTTTGGTAGCTGATATACCTCAAGCTATTGAAGCTTTGGAGAAAGGGGACCCTAAATTTGCAGAAGATGGTGCTAATGATGCTGCTAATGAAGCTACTTATTGTGAGAATGAGTTTAATGGGAAATCACCACTTACTAAACAGAACAATGCTATGCATGATGTTTCAGCTGTTACAGCAGCTATGGTTAGACAATTACTCTAA 549 0.3661 MTTNFKPLTLCLCLQAIFLIISIPTTHSRTTFLAKDEKLSLIQNTCKKTPNYNICLQSLKANSASSVSDVTGLAQIMVKVMKAKANDGLNKIHQLQKLGNGARKALNSCGDKYRAILVADIPQAIEALEKGDPKFAEDGANDAANEATYCENEFNGKSPLTKQNNAMHDVSAVTAAMVRQLL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1900 182 Pfam Plant invertase/pectin methylesterase inhibitor 40 177 IPR006501 GO:0004857
Tpr4g1900 182 PANTHER PECTINESTERASE INHIBITOR-LIKE 18 182 - -
Tpr4g1900 182 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 182 IPR035513 -
Tpr4g1900 182 SMART PMEI_2 37 177 IPR006501 GO:0004857
Tpr4g1900 182 CDD CIF_like 40 181 IPR034087 GO:0004857|GO:0043086
Tpr4g1900 182 TIGRFAM PME_inhib: pectinesterase inhibitor domain 17 181 IPR006501 GO:0004857
Tpr4g1900 182 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 181 IPR035513 -
Tpr4g1900 182 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 18 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1900 Tpr-Chr4 19941692 19942578 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1900 - - gmx:100500640 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1900 4 19941692 19942578 Tpr4g1900 4 19941692 19942578 ECH