Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1893 ATGACAATGTTAAAGCCAATATCATTTCTCATTCTCATTGTGTGCACTAATTTTGTTGTAATTGAGTGCAGAACTATCCAACCAAATGATGAAAATTTGATACAACAAATATGCAAAAAGACTCCAAATTATGCACTTTGCATTCAGTACCTTCATTCTGACCCTAAAGCTCCTTCAGCAGATGTTAGAGGTTTAGCACTAATCATGGTTAATGTAATGAAGAACAAAGCAAACATTGCTATAAACAAAATCCATCAACTTATTGGAAAGAGTCCTCCTGATCAAAAGGAGGCACTCGATAATTGCGCAGATAATTACAATGCAATTGTGGTAGCAGATATTCCAGAAGCCACTGAAGCTTTGCTAAAAGGAAACCCAAAATTTGCAGAAGATGGTGCAAATGATGCTGTTGTTGAGGCTAGAGGTTGTGAGAATGGTTTCAAAGGGAAATCACCACTCACTGCTGAAAACAATGCTATGCGTGATGCATCTGCCATAACAGCAGCTATTGTTAGAAATTTGTTATAA 528 0.3674 MTMLKPISFLILIVCTNFVVIECRTIQPNDENLIQQICKKTPNYALCIQYLHSDPKAPSADVRGLALIMVNVMKNKANIAINKIHQLIGKSPPDQKEALDNCADNYNAIVVADIPEATEALLKGNPKFAEDGANDAVVEARGCENGFKGKSPLTAENNAMRDASAITAAIVRNLL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1893 175 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 175 IPR035513 -
Tpr4g1893 175 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 174 IPR006501 GO:0004857
Tpr4g1893 175 PANTHER PECTINESTERASE INHIBITOR-LIKE 18 175 - -
Tpr4g1893 175 Pfam Plant invertase/pectin methylesterase inhibitor 32 170 IPR006501 GO:0004857
Tpr4g1893 175 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 18 175 - -
Tpr4g1893 175 CDD CIF_like 31 174 IPR034087 GO:0004857|GO:0043086
Tpr4g1893 175 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 174 IPR035513 -
Tpr4g1893 175 SMART PMEI_2 29 170 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1893 Tpr-Chr4 19903284 19903811 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1893 - - adu:107462721 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1893 4 19903284 19903811 Tpr4g1893 4 19903284 19903811 ECH