Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1890 ATGAATATCGTCAGTCCTGTTACTCCCGGTCAGGTCTCGTTCTTGCTCGGGATCATTCCGGTGATTATAGCATGGATATATTCCGAGATGTTGGAGTATCGGAAAAATACTTTAATTTCCAAAGCGCATTCGGACATAAACTTGGTTGAAGTGGGCAGTGGTGTTGTTATTAAAGATGAAGAGGAAGCAGTTTTATTGGAGGGAGGAGGTAAACAGCCAGCTTCCCCAACTACAAAAACTCGAAGCTCAACTGCCTCACCATCAATTATCCGATTCCTCTTGTTGGATGAACATTTCCTTATTGAAAACCGTTTGACACTTAGAGCCATGTCTGAATTCGGTCTTCTTTTGGCTTACTACTATTTGTGCGATCGCACAGATTTCTTTGGCTCATCAAAAAAGAGTTACAATAGGGATCTATTCATCTTCCTCTATTTTCTCCTCATCATAGTTTCAGCAATAACTTCATTTACAATACATCATGACAAGTCACCATTTTCTGGGAAATCCATACTTTACTTAAATAGGCATCAGACTGAAGAATGGAAAGGCTGGATGCAGGTATTGTTTTTGATGTACCATTACTTTGCTGCATCTGAAATCTACAATGCAATTCGTTTGTTCATTGCTGCATATGTTTGGATGACTGGATTTGGAAACTTCTCATATTATTATATTCGTAAAGATTTTAGCATGGCAAGATTTGCTCAGATGATGTGGCGGCTTAATTTCTTGGTATTGTTCTGTTGTGTTGTACTTAACAACAGTTACATGTTATACTACATCTGCCCCATGCACACTCTTTTCACTCTTATGGTTTATGGGGCACTCGGTATTTTCCACAAGTACAATGAGATTGGGTCAGTCATTGCTGCAAAAATTATTGCTTGCTTCTTGGTTGTTATTTTTGTATGGGAGATACCTGGAGTATTTGAATGGGTTTGGAGTCCATTTACTTTCCTGCTAGGTTATACTGATCCTGATCCATCTAAATCACATTTTTCCCGCTTGCATGAGTGGCATTTTCGCTCAGGGCTTGATCGCTATATTTGGATAATTGGAATGATATATGCTTATTATCATCCAACTGTTGAACGGTGGATGGAAAAATTGGAGGAAACAGAAATTAAACGCAGAATATCAATCAAAGCTTCTGTTGTGCTAATATCTTCAGTGATGGGTTATTTATGGTTTGAGCATATATACAAGCTGGACAAAGTTACTTATAACAAATACCATCCTTATACCTCGTGGATTCCTATAACGGTTTACATATGCTTGCGCAATATTACACAAAGTTTTCGTAGCTATTCGCTGACCCTTTTTGCGTGGCTTGGGAAGGTTACCCTGGAGACTTACATATCCCAGATTCATATTTGGTTAAGATCAGGCATTCCAGATGGTCAACCCAAATTGTTACTTTCCCTGATCCCAGACTACCCAATGTTGAACTTCATGCTTACTACTTCCATATATGTTGCAATCTCCTATAGGCTCTTTCAGCTGACCAATACACTGAAAAATGCATTTGTGCCTGGCAAAGATGACAAGCGTCTGATTCACAACCTAATTACCGGGACAACAATCTCAGTTGTTTTATATACCTTATCCTTTGTCTTCCTTATGATACCCGAAGTCTTTGTTTGA 1647 0.388 MNIVSPVTPGQVSFLLGIIPVIIAWIYSEMLEYRKNTLISKAHSDINLVEVGSGVVIKDEEEAVLLEGGGKQPASPTTKTRSSTASPSIIRFLLLDEHFLIENRLTLRAMSEFGLLLAYYYLCDRTDFFGSSKKSYNRDLFIFLYFLLIIVSAITSFTIHHDKSPFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAASEIYNAIRLFIAAYVWMTGFGNFSYYYIRKDFSMARFAQMMWRLNFLVLFCCVVLNNSYMLYYICPMHTLFTLMVYGALGIFHKYNEIGSVIAAKIIACFLVVIFVWEIPGVFEWVWSPFTFLLGYTDPDPSKSHFSRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEETEIKRRISIKASVVLISSVMGYLWFEHIYKLDKVTYNKYHPYTSWIPITVYICLRNITQSFRSYSLTLFAWLGKVTLETYISQIHIWLRSGIPDGQPKLLLSLIPDYPMLNFMLTTSIYVAISYRLFQLTNTLKNAFVPGKDDKRLIHNLITGTTISVVLYTLSFVFLMIPEVFV* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1890 548 Pfam 10 TM Acyl Transferase domain found in Cas1p 105 521 IPR012419 -
Tpr4g1890 548 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 7 544 - -
Tpr4g1890 548 PANTHER PROTEIN REDUCED WALL ACETYLATION 2 7 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1890 Tpr-Chr4 19887198 19894221 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1890 K03377 - gmx:100808555 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1890 4 19887198 19894221 Tpr4g1890 4 19887198 19894221 ECH