Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1879 ATGGGTACTTCTCAGAGCCGCGAAGGCCGTGAATTTTCCGATTCCGACTCCGATTACGACGATGAACACCAACACGATGAAGAAGAAGAAGAACAAGATCAATATCAAGACGCTCAAACTTCTTCTCAATCCCATTCCACACAGCTAGATGAAGTAGACGCTAAACTCAGCGCTTTAAAACTCAAATATTCATCTTCTTCTTCTTCACAATCACAATCAAAATCACAACCACACACAAAAACACCGCTTCCTAAAAACGCCGTCAAACTTTACCTTCACATCGGCGGCAACACTCCTAACGCAAAATGGATCATCTCCGACAAACGCACTTACTACGAATTCGTCAAATTCGACGAAGACGATTACGAAGATGAGGAACAAAACGACGTCGCTCAAGGCCAATGGATTCTCAAAGTCGGTTCCAAAATTCGCGCTAGGGTTTCCACCGAACTACAATTGAAGATGTTAGCCGATCAACGCCGTGTCGATTTTGTATCTAACGGTGTCTGGGCTCTTAAATTCCCCACCGATGAATCATACCGGAAATTCGTCACCGAATTTCAGGACTGTACTTTCGAGAATGTTTATGGTTTATCTCCAACTGAAGAACACAAGATCAAGGTTTATGGTAAGGAGTTTATCGGTTGGGTTAAGCCTGAAGCCGCTGATGATTCCGTTTGGGAAGATGCAGTTTCTGATGACGGTTCTTGGAAGACACCAGAGCCTTATAAATCTAGAGGTGATTTGATGGAGGAGTTTGAAGAGGCTGCAAATGGAGGTATTCAAACCCTAACCCTAGGAGCACTTGACAACAGTTTCCTTCTCAATGATGCCGGTTTTCAGGTTTACCGGAATTTTGATCGCGGGATTCGCAAGGGCGTTGCTGTGAAATTCGAAGGTGGAAACCTTCGGAATCAGACGCCGGACAAGGCGTTGTTGATGAGGGCAGAGACTAATATGATGCTGATGAGTCCGATGAATAGTGGAAAGCCACATGCTTCGAAGCTTCACCAGCTTGATATAGAAACTGGGAAGATTGTTACAGAGTGGAAATTCGAGAAAGATGGGGCTGATATCACAATGAGGGATATCACAAATGATACTAAGGGGTCACAGTTGGATCCCTCTGAATCAACTTTCTTAGGGTTGGATGATAACAGACTCTGTCAATGGGATATGCGTGATAGAAAAGGAATTGTTCAGAATATAGCTACGGCTAGTTCTCCGGTGTTGCATTGGAACCAGGGCCATCAATTTTCAAGAGGAACTAACTTTCAGTGCTTTGCAACAACTGGAGATGGTTCAATTGTGGTGGGTTCCCTTGATGGGAAAATAAGATTGTATTCGAAGACATCGATGAGGATGGCTAAGACTGCTTTTCCAGGGCTTGGTTCGCCGATTACAAGTGTTGATGTTACTTTTGATGGAAAGTGGGTGTTGGGTACAACTGATACTTATTTGGTGCTGATTTGTACATTGTTTACTGATAAAGATGGGAAGACAAAGACTGGTTTTGGTGGTCGTATGGGAAACAGGATCGGTGCTCCTAGATTGTTGAAGCTCACCCCTCTGGATTCGCATTTGGCTGGCACTACCAATAAGTTTCATGGTGGACATTTCTCATGGGTCACTGAGAATGGTAAACAAGAACGCCACCTTGTTGCGACTGTGGGCAAGTTCAGTGTGATATGGGATTTTCAGCAGGTAAAGAACAGTGCCCATGACTGTTACAGGAATCAACAAGGGCTGAAAAGCTGTTACTGTTATAAGATAGTATTGAAGGACGAGTCAATCATAGAATCACGATTTATGCATGACAAATATGCTGTTACTGATTCCCCTGAAGCTCCGTTGGTGGTAGCAACTCCTATGAAAGTTAGCTCTATCAGCCTGTCTGGAAAGCGACCCGGTTAA 1914 0.4399 MGTSQSREGREFSDSDSDYDDEHQHDEEEEEQDQYQDAQTSSQSHSTQLDEVDAKLSALKLKYSSSSSSQSQSKSQPHTKTPLPKNAVKLYLHIGGNTPNAKWIISDKRTYYEFVKFDEDDYEDEEQNDVAQGQWILKVGSKIRARVSTELQLKMLADQRRVDFVSNGVWALKFPTDESYRKFVTEFQDCTFENVYGLSPTEEHKIKVYGKEFIGWVKPEAADDSVWEDAVSDDGSWKTPEPYKSRGDLMEEFEEAANGGIQTLTLGALDNSFLLNDAGFQVYRNFDRGIRKGVAVKFEGGNLRNQTPDKALLMRAETNMMLMSPMNSGKPHASKLHQLDIETGKIVTEWKFEKDGADITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWDMRDRKGIVQNIATASSPVLHWNQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSKTSMRMAKTAFPGLGSPITSVDVTFDGKWVLGTTDTYLVLICTLFTDKDGKTKTGFGGRMGNRIGAPRLLKLTPLDSHLAGTTNKFHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHDCYRNQQGLKSCYCYKIVLKDESIIESRFMHDKYAVTDSPEAPLVVATPMKVSSISLSGKRPG* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1879 637 Pfam VID27 C-terminal WD40-like domain 303 578 IPR013863 -
Tpr4g1879 637 MobiDBLite consensus disorder prediction 20 35 - -
Tpr4g1879 637 MobiDBLite consensus disorder prediction 36 51 - -
Tpr4g1879 637 MobiDBLite consensus disorder prediction 1 51 - -
Tpr4g1879 637 PANTHER DEM PROTEIN 1 635 - -
Tpr4g1879 637 SUPERFAMILY Putative isomerase YbhE 335 533 - -
Tpr4g1879 637 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 27 1 635 IPR040458 -
Tpr4g1879 637 MobiDBLite consensus disorder prediction 63 82 - -
Tpr4g1879 637 MobiDBLite consensus disorder prediction 63 84 - -
Tpr4g1879 637 Gene3D - 332 557 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1879 Tpr-Chr4 19758892 19762594 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1879 1 635 Acyl Lipid Metabolism Gene Families AT3G19240 68.976 0.0 881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1879 - - adu:107469745 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1879 4 19758892 19762594 Tpr4g1879 4 19758892 19762594 ECH