Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1877 ATGCCTTCAGGTGGGGCAGTGGCTTATCACAATATGAGCCCCTCCGTCTTCCTCCTATTCCTTTTTGTCACTGTCCCTTTCCTTCCCCATTCTGCCCTCTCTAACCCTCTAGGGTTTTTTATAAATTGTGGGGGAACCAATGATGTAACAGTAGACAGTCTAAAATACATTGCTGATGGAAGCTACACAAAAGTTGGATCTGTTGCAACCATTAACAAAACAGACTTATTGCCAACACTTACCACATTGCGTTACTTCCCCAACACGCAATCTAGAAAATTTTGCTATACATTTCCAGTTATCAAAGGAAACAAATACCTTGTGAAGACTATATACTATTATGGAGAATTTGATGGAGGGAAACAGCCGCCGGTGTTCGATCAAATCATTGAAGGGACTAAATGGAGTGTTGTTAATACAACAGAAGACTATTCTAAAGGTCTTAGTTCTTATTATGAGGTTGTGGTTGTGTCTCATGGGAAGAAGTTGAGCGTGTGTTTGGCTAGGAATGAACATACTGGTACCTCAAGTCCCTTCATCTCTGCTTTGGAGGTTAAGAGTTTGGATGCTTCTTTGTATAATCCTATTGATTTTTCTAAGTATGCCCTTGTAACTGTTTCTAGGCATCATTTTGGAGGTGAAGATATCATTAGTTTTCCAGATGACAAATTTAACCGGATGTGGCAACCATTTAAGGACGAAAATCCAGTCGTGACAAGCAATTCAAATATTTCATCTTCAGATTTTTGGAACCTTCCTCCAGTTAAAGCAATTAGTACAGGAATAACCACAAGTAAAGGAAAACCACTTGAAATTCAATGGCCACCAGTGTTGCTTCAAAGTTCCTACTACTACATTTCTCTCTATTTTCAAGATAACAGAAATCCAAGCCCTTTTAGCTGGAGAACCTTTGATGTTGCTATCAATGGCCACACATTTTACGCCAACCTTAATGCCACATCTAAGGGTGTCACAGTTTATGCTGCACAGTGGCCACTTTCTGGACAGACCAAAATTACTATGACACCTTCTCCTGACATGCCTGTTGGACCTATTGTCAATGCTGGAGAAGTTTATCAGATTCTTCCCCTTAGCGGTCGAACTCAAACTAGAGACATAATTGCAATGGAAGATTTGGCTAAAAGTCTTCAAAATCCACCTCGTGATTGGAACGGTGATCCTTGTCGGCCTAAAGGGAATTCGTGGACTGGAGTTACCTGCTCTGATCAATTTATTGCACGAGTCATCGCATTGAATTTAACCAATGGTGGCATAGCTGGAACACTTCCTCAAACTATTGGCAATTTAACTGCTCTTTCTCATCTTTGGGTTGGAGGAAACAAACTCACAGGCATTATTCCTGACTTGCATGGACTGAGGGAGTTACAAACTTTGCATTTGGAGAATAACAAGTTTGAAGGGTCACTTCCTCCATCCATAGAGAAACTTCCGAAACTTCACGAAATTTCTTCTGATATTCAAATTAAAAAGTTGGATGCAAAAGCTACGAAACAAGTAAAGTGA 1524 0.4022 MPSGGAVAYHNMSPSVFLLFLFVTVPFLPHSALSNPLGFFINCGGTNDVTVDSLKYIADGSYTKVGSVATINKTDLLPTLTTLRYFPNTQSRKFCYTFPVIKGNKYLVKTIYYYGEFDGGKQPPVFDQIIEGTKWSVVNTTEDYSKGLSSYYEVVVVSHGKKLSVCLARNEHTGTSSPFISALEVKSLDASLYNPIDFSKYALVTVSRHHFGGEDIISFPDDKFNRMWQPFKDENPVVTSNSNISSSDFWNLPPVKAISTGITTSKGKPLEIQWPPVLLQSSYYYISLYFQDNRNPSPFSWRTFDVAINGHTFYANLNATSKGVTVYAAQWPLSGQTKITMTPSPDMPVGPIVNAGEVYQILPLSGRTQTRDIIAMEDLAKSLQNPPRDWNGDPCRPKGNSWTGVTCSDQFIARVIALNLTNGGIAGTLPQTIGNLTALSHLWVGGNKLTGIIPDLHGLRELQTLHLENNKFEGSLPPSIEKLPKLHEISSDIQIKKLDAKATKQVK* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1877 507 Pfam Malectin-like domain 41 361 IPR024788 -
Tpr4g1877 507 Gene3D Ribonuclease Inhibitor 371 494 IPR032675 -
Tpr4g1877 507 Pfam Leucine rich repeat N-terminal domain 379 408 IPR013210 -
Tpr4g1877 507 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-KINASE-RELATED 16 491 - -
Tpr4g1877 507 Gene3D - 36 188 - -
Tpr4g1877 507 PANTHER OS07G0107800 PROTEIN-RELATED 16 491 - -
Tpr4g1877 507 SUPERFAMILY L domain-like 395 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1877 Tpr-Chr4 19732912 19737194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1877 17 485 Receptor kinase-like Gene Family AT2G14510 28.659 3.14e-51 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1877 - - cam:101498863 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1877 4 19732912 19737194 Tpr4g1877 4 19732912 19737194 ECH