Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1874 ATGTATCCTCCAGTAAATGTAACAGATGGATATGCAGTTCATAGTCAAAATAGGCATACCCCTCAAGGCCATGTCCAACAAATACCAAGTTATGGCATGCCACAACAGTATCAGTATGCTCCTCCTCCTCCTCCTCCTCCTCTATATATGACCAGCACCAATTCTAGGGTCATCCCAAGGACACATCAATGGTCAACTGGTCTTTGCCGTTGTCTTGATGATCCTGGAATCTGTTTGGTCACTTGCTTCTGCCCTTGTATTACTTTTGGATTGATAGCAGAGAGAGTAGATAAAGGCAATTCAACTTGCACTTGTGATGGAACAATTTATGGGGCACTACTGGCTGTGACAGGACTTGCATGTTTATATTCATGTTATTATCGGTCCAAACTAAGGGCACAATATGACTTGCCAGAGGCACCTTGTATGGATTGCTTAGTTCATTTTTGTTGTGAAACTTGTGCTCTTTGTCAGGAATATAGAGAGCTCAAAAACCGTGGATATGACATGAGCATAGGGTGGAAAGCTAACATGGAAAGACAAGGGCAAAGATCAGTTACAGTGGCACCACCTATTTCACCAGCTATGACAAGATGA 597 0.4271 MYPPVNVTDGYAVHSQNRHTPQGHVQQIPSYGMPQQYQYAPPPPPPPLYMTSTNSRVIPRTHQWSTGLCRCLDDPGICLVTCFCPCITFGLIAERVDKGNSTCTCDGTIYGALLAVTGLACLYSCYYRSKLRAQYDLPEAPCMDCLVHFCCETCALCQEYRELKNRGYDMSIGWKANMERQGQRSVTVAPPISPAMTR* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1874 198 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 63 165 IPR006461 -
Tpr4g1874 198 PANTHER DUF614 FAMILY PROTEIN-RELATED 43 197 IPR006461 -
Tpr4g1874 198 Pfam PLAC8 family 64 162 IPR006461 -
Tpr4g1874 198 PANTHER PROTEIN PLANT CADMIUM RESISTANCE 2-LIKE 43 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1874 Tpr-Chr4 19628491 19631830 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1874 - - cam:101497874 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1874 4 19628491 19631830 Tpr4g1874 4 19628491 19631830 ECH