Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1856 ATGACTGAGTACTGGGTAAGTCAGGGAAACAAATGGTGTGATGTCTGCAAAATTTATATATCAAACAACCCTTCCAGCATCAGAAATCATGAGCTTGGAACACGCCACAAGGAAAATGTTACCAAGCGGCTTGCTAATATGAGAAAAGAGAATGCTGCTAAAGATAAAGAACACAAGGAAACAGCTAGTGCCCTTGAACAAATCGAAGCTAGAGCACAACGTAGCTATCAAAAGGATATGGCGAAGTTTGAGGAAGTCAAAGAATCACATGAATTGGATTCGCAACTTGAATGGGAGTTTGACAGCACTTCAGGCTATTACTACCATAAAACAAATGGATTTTGCTATGATCAAAAGTCGGGATTTTACTATTCTGATGCAATCGGCAAGTGGGTGACCCATGATGAAGCATATGCCTCACCTCACTTTGCATCAAATGCTGGGCGGAATGTACCATCTGGAAAAAAGGGCTCCATAATTTCACAATCCAAATCAGTTGACACCAAACCAAATATACATCATAATGTAGCTTTACCTCTTAGAGTGAATCCCATGAGACAAGCAAAAGCTGCCGCGTCATCTCTTGCTGTCGGTAAGAGAAAGAGACCCAATGAAAAACCAAAGGTTGTCTCGGAAGAAGAAAAACAAGCTCTCAAGGCAAGAGAGGCTGCAAGGAAAAGAGTGGAACAGAGGGAGAAACCTATGCTTGGGCTTTACAGCAAGCCTTACTAA 732 0.418 MTEYWVSQGNKWCDVCKIYISNNPSSIRNHELGTRHKENVTKRLANMRKENAAKDKEHKETASALEQIEARAQRSYQKDMAKFEEVKESHELDSQLEWEFDSTSGYYYHKTNGFCYDQKSGFYYSDAIGKWVTHDEAYASPHFASNAGRNVPSGKKGSIISQSKSVDTKPNIHHNVALPLRVNPMRQAKAAASSLAVGKRKRPNEKPKVVSEEEKQALKAREAARKRVEQREKPMLGLYSKPY* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1856 243 SMART ZnF_U1_5 8 43 IPR003604 GO:0003676|GO:0008270
Tpr4g1856 243 Pfam OCRE domain 97 145 IPR041591 -
Tpr4g1856 243 Coils Coil 37 57 - -
Tpr4g1856 243 ProSiteProfiles Zinc finger matrin-type profile. 11 42 IPR000690 GO:0003676|GO:0005634|GO:0008270
Tpr4g1856 243 Pfam U1 zinc finger 11 43 IPR013085 GO:0008270
Tpr4g1856 243 PANTHER WW DOMAIN BINDING PROTEIN 4 1 167 IPR040023 GO:0000398
Tpr4g1856 243 Gene3D Classic Zinc Finger 9 87 - -
Tpr4g1856 243 Coils Coil 211 231 - -
Tpr4g1856 243 SUPERFAMILY beta-beta-alpha zinc fingers 12 56 IPR036236 -
Tpr4g1856 243 MobiDBLite consensus disorder prediction 199 234 - -
Tpr4g1856 243 MobiDBLite consensus disorder prediction 191 243 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1856 K13220 - gmx:100804274 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1856 4 19444875 19449930 Tpr4g1856 4 19444875 19449930 ECH