Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1854 ATGGATCAATGGTTCTTGGTAATGCTCTCAAATCTTCTTCATCTTCACAACTCTCTCGATCCAACCACCGACACACTCTCCACCACCGCAACCTCCTCCGCTAACTCCACCACAACTCTCCTCCATTCATCCTCAATCGCACCTCTCCTTCTCTTCACCATGGCTTCCGTCCTTTCCTACGTCGCATCAACCCGTACTCCATCCTCACCTTCCAACAACAACCGCCGTAAGAAACGCCGTCGGAACCCTAACGCCTCCGATTACTCCGTCGCAGCTTTCCGTGCTCTTTCAACGGAACACATCTGGTCTCTCGAAGCTCCACTCCGTGACGCGCAGTGGCGTTCTCTTTACGGTCTCTCTTACCCAGTTTTCACCACCGTCGTTAATAAACTCAAACCCCACATCGCCATTTCAAATCTTTCCCTCCCTTCCGATTACGCTGTTGCTATGGTTCTCTCTCGTCTCGCTCACGGTCTCTCTGCGAAAACCATCGCTTCTCGTTACTCCCTTGAACCTTACCTTGTTTCCAAAATCACAAACATGGTCACGCGCCTTCTTGCAACCAAACTCTACCCTGAATTCATCAAAATCCCAGTTGGTCGTCGCCGACTCATTGAAACCACTCAAGCCTTTGAAGAACTCACCTCACTTCCTAACATGTGTGGTGCTATTGATTCTAGCCCTGTTAAGCTTCGTTCTGGTCCTAGTTCTAACCCTGCTACGTATCATTCGCGATATGGTTACCCTTCAGTTCTTCTTCAGGTTGTTTCTGATCACAAAAAGATTTTCTGGGATGTTTGTGTTAAAGCTCCTGGTGGCACTGATGATGCTACTCATTTTAGGGATAGTCTTCTCTACCAGCGTCTTACTTCAGGAGATGTTGCTTGGGAAAAGGTTATCAATGTTCGCGGTCACCATGTTCGTCCTTATGTTGTTGGTGATTGGTGTTATCCTTTGTTGCCATTTTTGCTTACACCTTATTCGCCTAGTGGGATGGGTACTCCTGCGCAGAATCTGTTTGATGGAATGCTTATGAAGGGTAGGTCTGTGGTTGTGGATGCTATTGCTTTGCTTAAAGGAAGGTGGAAGATTCTTCAGGAATTGAATGTGGGTCTTCATCATGTGCCGCAAACGATAGTTGCTTGTTGTGTTTTGCATAATTTGTGTCAAATTGCTAGGGAACCTGAACCGGAGCCGTGGAAGGAGCCTGATGAGAGTGGAGCTCAACCTAGGATGCTGGATAGTGAGAAGTCTTTCTATTTCTTTGCAGAAAGCTTGAGGCAAGTTCTGACTGAGGATTTGCACCAAAAGCTCTCTTCAAGATAG 1326 0.4713 MDQWFLVMLSNLLHLHNSLDPTTDTLSTTATSSANSTTTLLHSSSIAPLLLFTMASVLSYVASTRTPSSPSNNNRRKKRRRNPNASDYSVAAFRALSTEHIWSLEAPLRDAQWRSLYGLSYPVFTTVVNKLKPHIAISNLSLPSDYAVAMVLSRLAHGLSAKTIASRYSLEPYLVSKITNMVTRLLATKLYPEFIKIPVGRRRLIETTQAFEELTSLPNMCGAIDSSPVKLRSGPSSNPATYHSRYGYPSVLLQVVSDHKKIFWDVCVKAPGGTDDATHFRDSLLYQRLTSGDVAWEKVINVRGHHVRPYVVGDWCYPLLPFLLTPYSPSGMGTPAQNLFDGMLMKGRSVVVDAIALLKGRWKILQELNVGLHHVPQTIVACCVLHNLCQIAREPEPEPWKEPDESGAQPRMLDSEKSFYFFAESLRQVLTEDLHQKLSSR* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1854 441 PANTHER NUCLEASE HARBI1-RELATED 7 440 - -
Tpr4g1854 441 PANTHER UNCHARACTERIZED 7 440 IPR045249 -
Tpr4g1854 441 MobiDBLite consensus disorder prediction 64 84 - -
Tpr4g1854 441 Pfam DDE superfamily endonuclease 225 387 IPR027806 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1854 Tpr-Chr4 19436303 19438349 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1854 - - gmx:100807145 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1854 4 19436303 19438349 Tpr4g1854 4 19436303 19438349 ECH