Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1818 ATGGGAGAGGTGGATTCAGCTTTCATTCAAATTCCAGAAAACAGGCCAAAACTTTCCATCATCCAAGCTGAAGGAATTCCTGTAATCAATCTCTCCCCAATAATCGACAACACAATTCAAGACTCCTCTGCCATAGAAAGCTTAGTCAAAGAAATAGCAAGTGCTTGCAAGGAATGGGGTTTCTTCCAAGTAACAAACCATGGCGTCCCTCTAAATCTCAGGCTCAGAATCGAGGAAGCTTCCAAAGTTTTCTTTGCACAGAGTTTGGAGGAGAAGAGGAAGCTTACCATAGATGATATTGGTTTTCCTGGTTATCAAGATACAGAACACACCAAGAATGTCAGAGACTGGAAAGAAGTGTTTGATTTTTTATCCAAAGACCCTACTTTGATTCCTCTGAATTCTGATGAACATGATGATCGAGTCACTCGATGGACTAATCCATCTCCTCAATACCCTCCACACTTCAAAGTTATTATTGAAGAGTATATTAAAGAGATGGAAAAGGTAGGCTTTAAGTTGCTAGAACTTATAGCTCTTAGCTTAGGAGTTGAAGCAAAGAGGTTTGAAGAATTCTTCATAAAAAATCAAACTAGTTTTCTCAGACTTAACCACTATCCTCCATGTCCTTACCCTCACCTTGCTCTTGGTGTTGGTCCTCATAAGGACTCTGGTGTCTTAACCATCCTTGCTCAAGATGAGGTTGGAGGACTTCAAGTGAAGCGTAAAACAGATCAGCAGTGGATTCTGGTGAAGCCCACCCCAGATGCTTACATTATTAATGTTGGTGATATCATTCAGATTTGGAGCAATGACGCCTATGAGAGTGTGGAGCACAGAGCAATGGTGAACACGGAGAAAGGAAGGTTTTCTATTCCATTCTTCTTCAACCCAGGACATGATACTGAAGTCAAGCCATTAGAGGAGCTTATAAATGAGCAAAATCCTTCAAAATATAGGCCATATAAATGGGGCAATCAATGA 984 0.4065 MGEVDSAFIQIPENRPKLSIIQAEGIPVINLSPIIDNTIQDSSAIESLVKEIASACKEWGFFQVTNHGVPLNLRLRIEEASKVFFAQSLEEKRKLTIDDIGFPGYQDTEHTKNVRDWKEVFDFLSKDPTLIPLNSDEHDDRVTRWTNPSPQYPPHFKVIIEEYIKEMEKVGFKLLELIALSLGVEAKRFEEFFIKNQTSFLRLNHYPPCPYPHLALGVGPHKDSGVLTILAQDEVGGLQVKRKTDQQWILVKPTPDAYIINVGDIIQIWSNDAYESVEHRAMVNTEKGRFSIPFFFNPGHDTEVKPLEELINEQNPSKYRPYKWGNQ* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1818 327 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 2 323 - -
Tpr4g1818 327 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 2 323 - -
Tpr4g1818 327 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 197 298 IPR005123 -
Tpr4g1818 327 Gene3D - 1 327 IPR027443 -
Tpr4g1818 327 SUPERFAMILY Clavaminate synthase-like 3 325 - -
Tpr4g1818 327 PRINTS Isopenicillin N synthase signature 52 69 - -
Tpr4g1818 327 PRINTS Isopenicillin N synthase signature 221 242 - -
Tpr4g1818 327 PRINTS Isopenicillin N synthase signature 286 304 - -
Tpr4g1818 327 Pfam 2OG-Fe(II) oxygenase superfamily 199 298 IPR044861 -
Tpr4g1818 327 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 145 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1818 Tpr-Chr4 18990881 18997553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1818 11 320 Glycosyltransferase AT5G59530 33.019 2.06e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1818 - - gmx:100809985 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1818 4 18990881 18997553 Tpr4g1818 4 18990881 18997553 ECH