Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1816 ATGTTTTTGAAACAACCTCTTAAATATATAAGAGAACACACAACAAAACCCATCTTCAACATTGATTTTACAAACACTAACAACAGAACAACCATGGGAGAAGTAGACCCAGCTTTTGTTCAAGAACAAGAACACAGACCAAAACTCTCCATAATCGAAGCCAAAGGAATTCCCGAAATTGACCTCTCACCAATATTCAACCATGATGTTCCAGATCAATCTGCTGTTGATGCCTTAGTGAAGGAAATTGGAAGTGCATCCAAAGAGTGGGGATTCTTTCAAGTTACAAACCATGGTGTTCCTTTGAGTCTTAGACAGAGACTTGAGGAAGCTTCTAGATTGTTTTTTGCTCAGAGTTTGGAGGATAAGAAGAAAGTTGCGAGAGATGAGATTAATCCAACTGGTTATTATGATACAGAGCATACCAAGAATGTTAGGGATTGGAAAGAAGTGTTTGATTTTCTTTCTCAAGATCCTACTTTTGTTCCTCTGAATTCTGATGAAGATGATCATCAAGTTATTCAATGGTCTAATCCTTCCCCTCCATATCCTCCACAATTCAGGGCTATAGTTGAAGAGTATCTTGAAGAGATGGAAAAGTTGGCCTATAAGTTGCTGGAGCTAATAGCTTTGAGCTTAGGACTTGAAGCAAAGAGGTTTGAAAAATTCTTCAAACTTCAAACTAGCTTTATTAGATTCAATCACTATCCTCCATGCCCTTATCCTCACCTAGCTCTTGGCGTCGGACGACACAAAGATGCTGGTGCCTTAACTATTCTTGCCCAAGATGAGGTTGGAGGACTTGAAGTGAAGCGTAAATCAGATCAAGAGTGGGTTCTTGTGAAACCTACTCCGGATGCTTACATTATTAACGTTGGTGATATCATTCAGGTTTGGAGCAATGACGCATATGAGAGTGTGGAACATAGAGTAATGGTTAACTCTCAAAGAGAAAGGTTTTCAATTCCTTTCTTTTTCTTCCCTGCACATGATACTGAAGTCAAGCCTTTGGAAGAGCTGATAAATGATGAAAACCCTTCAAAATATAGACCTTACAATTGGGGCAAGTTTCTTGTCAACAGAAAGAGTAGCAATTTCCAGAAGAAAAAAGCGGAGAACGTCCAAATTTATCACTATAAAATAGCTTAA 1149 0.3856 MFLKQPLKYIREHTTKPIFNIDFTNTNNRTTMGEVDPAFVQEQEHRPKLSIIEAKGIPEIDLSPIFNHDVPDQSAVDALVKEIGSASKEWGFFQVTNHGVPLSLRQRLEEASRLFFAQSLEDKKKVARDEINPTGYYDTEHTKNVRDWKEVFDFLSQDPTFVPLNSDEDDHQVIQWSNPSPPYPPQFRAIVEEYLEEMEKLAYKLLELIALSLGLEAKRFEKFFKLQTSFIRFNHYPPCPYPHLALGVGRHKDAGALTILAQDEVGGLEVKRKSDQEWVLVKPTPDAYIINVGDIIQVWSNDAYESVEHRVMVNSQRERFSIPFFFFPAHDTEVKPLEELINDENPSKYRPYNWGKFLVNRKSSNFQKKKAENVQIYHYKIA* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1816 382 Gene3D - 25 369 IPR027443 -
Tpr4g1816 382 Pfam 2OG-Fe(II) oxygenase superfamily 230 328 IPR044861 -
Tpr4g1816 382 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 33 372 - -
Tpr4g1816 382 Pfam non-haem dioxygenase in morphine synthesis N-terminal 57 173 IPR026992 -
Tpr4g1816 382 PRINTS Isopenicillin N synthase signature 83 100 - -
Tpr4g1816 382 PRINTS Isopenicillin N synthase signature 251 272 - -
Tpr4g1816 382 PRINTS Isopenicillin N synthase signature 316 334 - -
Tpr4g1816 382 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 33 372 - -
Tpr4g1816 382 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 227 328 IPR005123 -
Tpr4g1816 382 SUPERFAMILY Clavaminate synthase-like 31 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1816 Tpr-Chr4 18972379 18974437 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1816 57 350 Glycosyltransferase AT5G59530 34.551 7.98e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1816 - - gmx:100810518 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1816 4 18972379 18974437 Tpr4g1816 4 18972379 18974437 ECH