Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1815 ATGGGAGAAGTAGACCCAGCTTTTGTTCAAGAACAAGAACACAGACCAAAACTGTCCATAATCGAAGCCAAAGGAATTCCCGAAATTGACCTCTCACCAATATTCAACCATGAAGTTCCAGATCAATCTGCTGTTGAAGCCTTAGTGAAGGAAATTGGAAGTGCATGCAAGGAATGGGGATTCTTTCAAGTTACAAACCATGGTGTTCCTTTGAGTCTTAGACAGAGACTTGAGGAAGCTTCTAGATTGTTCTTTGCTCAGAGTTTGGAGGATAAGAAGAAAGTTGCGAGAGATGAGATTAATCCAGCTGGTTATTATGATACAGAGCATACCAAGAATGTTAGGGATTGGAAAGAAGTGTTTGATTTTCTTGTTAAAGATCCTACTTTTGTTCCTCTCAATTCTGATGAAGATGATGATCAAGTTATTCAATGGTCTAATCCATCCCTTCCATATCCCCCACAATTCAGGGCTATAGTTGATGAGTATCTTGAAGAGATGGAAAAGTTGGCCTTTAAGTTGCTGGAGCTAATAGCATTGAGCTTAGGACTTGAAGCAAATAGGTTTGAAGAATTCTTCAAACTTCAAACTAGCTTTATTAGATTCAATCACTATCCTCCATGCCCTTATCCTCACCTAGCTCTTGGCGTCGGACGACACAAAGATCCCGGTGTCTTAACTATTCTTGCCCAAGATGATGTTGGAGGACTTGAAGTGAAGCGTAAATCAGATCAAGAGTGGGTTCTTGTGAAACCTACTTCAGATGCTTACATTATTAACGTTGGTGATATCATTCAGGTTTGGAGCAATGATGCATATGAGAGTGTGGAACACAGAGTAATGGTTAACTCTCAAAGAGAAAGGTTTTCAATTCCTTTCTTTTTCTTCCCTGCACATGACACTGAAGTCAAGCCTTTGGAGGAGCTGATAAATGATGAAAATCCTTTAAAATATAGACCTTACAATTGGGGCAAGTTTCTTATCAACAGAAAGAGTAGCAATTTCCAGAAGAAAAAAGCGGAGAACGTACAAATTTATGACTATAAGATAGCTTAA 1056 0.3902 MGEVDPAFVQEQEHRPKLSIIEAKGIPEIDLSPIFNHEVPDQSAVEALVKEIGSACKEWGFFQVTNHGVPLSLRQRLEEASRLFFAQSLEDKKKVARDEINPAGYYDTEHTKNVRDWKEVFDFLVKDPTFVPLNSDEDDDQVIQWSNPSLPYPPQFRAIVDEYLEEMEKLAFKLLELIALSLGLEANRFEEFFKLQTSFIRFNHYPPCPYPHLALGVGRHKDPGVLTILAQDDVGGLEVKRKSDQEWVLVKPTSDAYIINVGDIIQVWSNDAYESVEHRVMVNSQRERFSIPFFFFPAHDTEVKPLEELINDENPLKYRPYNWGKFLINRKSSNFQKKKAENVQIYDYKIA* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1815 351 PRINTS Isopenicillin N synthase signature 52 69 - -
Tpr4g1815 351 PRINTS Isopenicillin N synthase signature 220 241 - -
Tpr4g1815 351 PRINTS Isopenicillin N synthase signature 285 303 - -
Tpr4g1815 351 Gene3D - 1 338 IPR027443 -
Tpr4g1815 351 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 196 297 IPR005123 -
Tpr4g1815 351 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 2 342 - -
Tpr4g1815 351 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 2 342 - -
Tpr4g1815 351 Pfam 2OG-Fe(II) oxygenase superfamily 199 297 IPR044861 -
Tpr4g1815 351 Pfam non-haem dioxygenase in morphine synthesis N-terminal 26 135 IPR026992 -
Tpr4g1815 351 SUPERFAMILY Clavaminate synthase-like 3 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1815 Tpr-Chr4 18917964 18925286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1815 26 319 Glycosyltransferase AT5G59530 33.555 2.05e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1815 - - gmx:100101864 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1815 4 18917964 18925286 Tpr4g1815 4 18917964 18925286 ECH