Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1814 ATGGTTAATCTAGAAACAGAGCCAAGTTCACCATTTATTCAATCCCAAGAACACAGACCAAAATCTTCAATAATCATTGCTGAAGGTATCCCTCTAATTGATCTCACTCCCATAAACTACAAAGATGAAATCATCACCAACTCACTTTCCATTGAAGGTTTAGTCAAAGAAATAGGTAAAGCATGTAAAGAGTGGGGTTTCTTTCAAGTGATTAATCATAAAGTGCCTTTGGATAAACGTGAGAGGATTGAAGAATGTTCAAGGAAGTTTTTTGGACTTAGTTTGGAGGAAAAGGTTGAGGTTAGAAGAGATGAAGTTAATTTGCTTGGGTATTTTGAAGCAGAGCATACAAAAAATGTTAGGGATTGGAAGGAAATTTATGATTTTAATGTGCAACAACCAACTTTTATACCACCTTCTGATGATGAGCAAAGTTTTCAGTTTCAATGGGAAAATCGATGGCCTCATAATCCTCCTGATTTCAGGGAAGCATGCCAAGAATATGCAGATGAAGTGGAGAAACTAGCTTATAAATTGATGGAACTTATTGCAATGAGTTTAGGTTTAGTACCAAGTAGGTTCCGTGATTTCTTCATACATAACACAAGCAATATAAGACTAAATCATTATCCACCTTGCCCTTATCCTCATCTTGCTCTTGGTCTTGGACGTCACAAAGACACTGGTGTCTTAACTGTGCTTGCTCAAGATGATGTTGGTGGTTTACAAGTTAAGAGAAAATCAGATGGAGAATGGATTCAAGTTAAGCCTATTTTTAATTCCTTCATCATTAATGTTGGTGATATGATTCAGGTTTGGAGCAATGATGCTTATGAGAGTGTAGAGCACAGAGTTATGGTGAACTCTGAGAAGGATAGATTTTCCATTCCGTTCTTTTTGAAACCGGCACTCTACACTGATGTCGAGCCCTTGGCAGAGTTGACAAACGATAGGAATCCTCCGAAATATTCACCAATCAACTGGGGCAAGTTCCGCACTGCAAGAATGAAAAGTAATTTTGCTAAATCTAATGTTGATAACCTTCAAATTTATCATTTCAAGCTTTCCCAGTGA 1074 0.3724 MVNLETEPSSPFIQSQEHRPKSSIIIAEGIPLIDLTPINYKDEIITNSLSIEGLVKEIGKACKEWGFFQVINHKVPLDKRERIEECSRKFFGLSLEEKVEVRRDEVNLLGYFEAEHTKNVRDWKEIYDFNVQQPTFIPPSDDEQSFQFQWENRWPHNPPDFREACQEYADEVEKLAYKLMELIAMSLGLVPSRFRDFFIHNTSNIRLNHYPPCPYPHLALGLGRHKDTGVLTVLAQDDVGGLQVKRKSDGEWIQVKPIFNSFIINVGDMIQVWSNDAYESVEHRVMVNSEKDRFSIPFFLKPALYTDVEPLAELTNDRNPPKYSPINWGKFRTARMKSNFAKSNVDNLQIYHFKLSQ* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1814 357 Gene3D - 3 343 IPR027443 -
Tpr4g1814 357 PANTHER GIBBERELLIN-44 DIOXYGENASE-RELATED 6 347 - -
Tpr4g1814 357 PRINTS Isopenicillin N synthase signature 58 75 - -
Tpr4g1814 357 PRINTS Isopenicillin N synthase signature 225 246 - -
Tpr4g1814 357 PRINTS Isopenicillin N synthase signature 290 308 - -
Tpr4g1814 357 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 201 302 IPR005123 -
Tpr4g1814 357 Pfam non-haem dioxygenase in morphine synthesis N-terminal 30 157 IPR026992 -
Tpr4g1814 357 Pfam 2OG-Fe(II) oxygenase superfamily 203 302 IPR044861 -
Tpr4g1814 357 SUPERFAMILY Clavaminate synthase-like 9 341 - -
Tpr4g1814 357 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 6 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1814 Tpr-Chr4 18911894 18914455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1814 30 350 Glycosyltransferase AT5G59530 32.209 1.15e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1814 - - gmx:100808372 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1814 4 18911894 18914455 Tpr4g1814 4 18911894 18914455 ECH