Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1779 ATGGACGACGAATTGCTCGAGTTGCAGCGACAGTTCGAGTTCGCTCAACAAGCAAAATCCAGTATCCGATTATCCGATCGAAACGTCGTCGAATTAGTCCAAAAATTGCAACAACTTCAAATCATCGATTTCGAGCTTCTTCACACTGCTTCTGGCAAAGAATACATCACTCTCGATCAACTGAGAAATGAGATGATTGCTGAGGTGAAAAAATTAGGGCGAATTTCTGTGATTGATCTTGCTGATGTTACTGGAGTTGACTTGTATTATGTTGAGAAATTAGCTCAGAATATTGTAACGGATCATGGAGAATTGATGTTGACTCAAGGGGAAATTATTACGGAATCGTATTGGGACTCAATTGCGGAAGAGATTAATGAGAGGCTTCAAGAATGTAGTCAGATTGCATTGACGGAACTCGCGGCGCAGTTGAATGTTGGTTTGGATTTGATTGCTTCTGTGTTTGAGCCGCGCCTTGGAACTATAGTGAAAGGAAGGCTTGAAGGTGGGCAGTTGTATACTCCTGCTTATGTTGCTCGTGTTAGTGCTATGGTTCGAGGTGCTGCGAGGGGAATCACGGTTCCAACGAATTTGACAGTGTTATGGAGTTCGTTGCAGAATTTACTGCAAGAAATGGATGGAGCTAGTGGTGTGGCTGTTGACGGATCTTTCTTCCAGTCTTTGTTTAATGGACTTGTGAAGGGAGGCGAGATTTTAGGGTCTGTTCGTGCTGGAGTGCATTGGACACCAGCTGTATTTGCTGTTGCTCAAAAGGAATCTGTGGATTCATTCTTTTCACAAAATTCTTTCATCAGCTATGATGTTCTGCAAAAACTTGGAATTCCCCAGCCCATTCAATTCTTGCAGTCCAGATATCCTGAAGGCAAACCTCTTGTTACAACATTTGTGCACCCATCGATGATTGAGATGCTAGATGCTGCTATTGAGGATGCTCTAGAACGTGGTAGCTGGAGTGATTCTCTTTCCTTATTGCCCTCATCTTTTACACCCCAAGATGCATCTAAAATGTTGTTCCTCTGTCAATCTGTACAATTGGCCCTTAAGTCTAACAAAGCACATATATTTGGGGACATTTATGTGTTAAGCAGCAGCTTTATGAAGGACATTTGTGATCGCATGGTGAAAGAATTAGAGACATTGGCTATTTCAAGGTCTTTGGGCACTGCAAAACCTGGTGATTTACCTATAGCCAATGAAGTAAAAGCAGGGTATGATTCAAGCAGGTTGAGTGAGTCCAGCGAAATGGCGAGTGATAGTGGTTCCAACAAGCATGCTGATAAAGGGTCAAAGAAGAAAAAGGGAAAAGCCACTGGAAATGCATTAGCAAATCAATCTGAAAGTGTTCCTGATAAACAAGAACATACTTCCACAAAATCTAAGAAAAACCAGAGAAGGGGTAAGGATACATCTTCCCAAACATCAGACTCAAAGCCAGGTTCTAGGAAAGAATCACTTAAAATGAAAGAGGATGATCTCAGTAGTCCCTCAGAAGAATGGATCATGGAGAAGATTACAGCCTTGATTCCTGATTTTGAAGAACAAGGTCTTGATGATCCTGAAATGATCCTTAGGCCTTTGGCTAACAAGTTAAGGCCTACAATAATCAGTACTTGGATAGAGAAAAAGAAGGCATTGTTTAAAGACAATGCAGAAAGAATGAAACAATTGCTTGATAATTTGCAGAAGAAACTTGATGAGTCTTTCTTAAACATGCAGCTGTATGAAAAAGCCTTAGAATTGTTTGAAGATGATCAATCAACTTCTGTTGTTTTGCATAGACATTTACTAAGGACAATAGCAGCTCCTATGGTTGATATGCTTCTTCATGACTTGGACGAGCACAACAAATTAAAGAACGGAGTTGAAGTGCAGGATTCTCCAAGTTCTGAGTCTATTTCATTTAGTCCTGGAGATAGAGCTGCAATTTCCAAGAGTTTTCCAGGAGCTCTTGCAAATAAGGCTCTTGCTGTTGTAGAAGCATTGGAAGGAAAGAGGGTGGAAACATTCATGTCTGCATTCAGAACTGTAACGGAAGAGAGTGGGTTGCCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTTCTACATTCATATCGTAAGGAATTGACATCTCAAGTTTCGGCTGAGACTGACCCTGTATCACTTCTACCAAAAGTTGTGTCTTTACTCTATGTCCAGGTTCACCATAAAGCTCTTCAAGCTCCTGGAAGGGCCATTTCGGTTGCTATTTCTCACTTGAAGGATAAGCTAGATGAGTCAGCATGCAAGATTTTAGCTGATTATCAAACTGCTACCGTGACTCTTTTGGCACTATTATCAGCTGCTCCTGATGATGAAAACAGTTGTGCATCTGATAGAATTGTGAGTAAAAGAGAGCTTCTGGAGAGCCAAATGGCAGCTTTAAAAAACTTGGTTTTGACCACTTCACAACAGTCATAA 2463 0.4097 MDDELLELQRQFEFAQQAKSSIRLSDRNVVELVQKLQQLQIIDFELLHTASGKEYITLDQLRNEMIAEVKKLGRISVIDLADVTGVDLYYVEKLAQNIVTDHGELMLTQGEIITESYWDSIAEEINERLQECSQIALTELAAQLNVGLDLIASVFEPRLGTIVKGRLEGGQLYTPAYVARVSAMVRGAARGITVPTNLTVLWSSLQNLLQEMDGASGVAVDGSFFQSLFNGLVKGGEILGSVRAGVHWTPAVFAVAQKESVDSFFSQNSFISYDVLQKLGIPQPIQFLQSRYPEGKPLVTTFVHPSMIEMLDAAIEDALERGSWSDSLSLLPSSFTPQDASKMLFLCQSVQLALKSNKAHIFGDIYVLSSSFMKDICDRMVKELETLAISRSLGTAKPGDLPIANEVKAGYDSSRLSESSEMASDSGSNKHADKGSKKKKGKATGNALANQSESVPDKQEHTSTKSKKNQRRGKDTSSQTSDSKPGSRKESLKMKEDDLSSPSEEWIMEKITALIPDFEEQGLDDPEMILRPLANKLRPTIISTWIEKKKALFKDNAERMKQLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTIAAPMVDMLLHDLDEHNKLKNGVEVQDSPSSESISFSPGDRAAISKSFPGALANKALAVVEALEGKRVETFMSAFRTVTEESGLPLKKLDKKLERTLLHSYRKELTSQVSAETDPVSLLPKVVSLLYVQVHHKALQAPGRAISVAISHLKDKLDESACKILADYQTATVTLLALLSAAPDDENSCASDRIVSKRELLESQMAALKNLVLTTSQQS* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1779 820 Coils Coil 550 584 - -
Tpr4g1779 820 MobiDBLite consensus disorder prediction 486 503 - -
Tpr4g1779 820 PANTHER E3 UFM1-PROTEIN LIGASE 1 1 818 IPR018611 GO:0061666|GO:0071569
Tpr4g1779 820 MobiDBLite consensus disorder prediction 412 503 - -
Tpr4g1779 820 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
Tpr4g1779 820 MobiDBLite consensus disorder prediction 458 478 - -
Tpr4g1779 820 MobiDBLite consensus disorder prediction 412 426 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1779 1 783 EF-hand Containing Proteins AT3G46220 61.881 0.0 965
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1779 K22755 - gmx:100808087 1265.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1779 4 18469080 18477503 Tpr4g1779 4 18469080 18477503 ECH