Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1743 ATGCATACCCCAAAGACAAGAAGTAGTACTTCTGAAGTGCCTCAGAAGGTTTCTCCACGTGCCGTGCGCCAACTTAGGACTACTACAACTCTAGACACTATCTCTGTATCTTCTTCTTCGACGCAAGCTAGTAAGATATCAAAGGAAAGAAGTCCCAAAGTCGCTGATCGAAAATCACCCAGAAGCCCAGTTCCTGAGAGGAAGCGCCCGAGCAAAATATCTGAATTGGAATCTCAAATTTCTCAACTTAAAGGAGATTTGAATAAGGTTAAGGACCAGCTTATTTTGTCTGAATCATGCAAGAAGCAAGCTCAGCAAGATGCCGAGGAATCCAAGGAGCAACTCTCAATCCTATCCGCAAAACTCGAAGAGTCTCAAAAGCAATATCTAGAGCTCTGTGCTACCGGAGAAGCTCGTGATATTGAGCTCCAGAGAATCACAGAAGAACGCGATAGGGCATGGCAATCCGAGCTCGAGGCCTCCCAAAAGCATCTCTCAGTTGACTCAACTGCTTTGGCTTCTGCAGTTAATGAAATTCAGCTGCTAAAGGCGCAGCTTGAATTGGTAGCTAATTATGAGAGTGTTCAAACTCAACATGCAGAATCAGCCGATAAAGAGCTACTGAATCTGAAACAAAACTTATCAGAATCTCTTTCTCTGATGGAGAACATGAAAAACCAACTGAAGAATTGCAAAGAGTCTGAATCTCAGACACAAGATGTTGTCGATGAAACTTTGTTGCAACTCGAGTCTGCGAAAAGAACTGTCGAGATTTTAAGGGATGATGTCACAAAAGACATAGCTGGCTACAACTCCGTTTCTTCGGAGTTAGAACAGTCTAGAGCTAGGGTGAACACACTAGCGACACTTGTTAGCAAACTTAAGACACGCGTCAACGATAATGAAAGGATTCATTCTGATCAATATCTTGTAGATGATCGTAAATTTGAGAAGGAACGTGAAATATTGAAAGATGGAGAGGATCCTAATCAGATTGAAGAAGAGATTTGTTCTTTGAAGTCCGAGGTTGGAAGGTTGACATCTGCTTTAGAGATCTCCGAGGCAAAATATCAAGAAGAACAGATTCAAAGCACGGTGCAGATAAAGAATGCGTACGAGTTGATGGAGCAGATAAAATCTGAATCAGGTCAGAAACAATGTGAGTTGGAGGCTGAATTACAAAGAAAGAAAACTGATATTGAAGAGTTGAAGGCTAATCTAATGGACAAAGAAACCGAGTTGCAAGGTATCATGGAAGAGAACGATAATTTGAATTCGAAGCTTGAAAAGAGCATGTCATCACAAAATGAACATGGAATTAATAAGGAACTTAAAAGATTGGAACAATGTGTGGATGAATTAAAAGCTGATATGATGGACAAAGAAACAACATTGCAAAGCATATCTGAAGAAAACGAGACGCTGAAGTTGGAAATCAGCAAGAGTTGCTCGGACGGTGGCAAAGCGAGTGAGGAAATGGAGAGAGCTAAGGCTGCAGAGCACGAGGCAGTTACGAAACTCGGGATAGTGATGGAGGAAGCAGACAGAAGCAACCGTAAAGCGGCAAGGGTGACGGAGCAGTTGGAAGCAGCACAAGCAGCGAGTTCAGAAATGGAAGGCGAACTTAGAAGGCTTAAGGTACAATCTGATCAATGGAGGAAGGCTGCAGAAGCAGCTGCTGCTATGCTTTCGGCCGGGAACAACGGGAAGCTTACCGAGAGATCCGTGTCTTTGGACAATAATAATAACTATAAGTGCTCATCACCTTATGCTGAAGATATTGATGATGATTTCCAAAGAAAGAAAAATGGTAACATGCTGAAGAAGATTGGAGTATTATGGAAGAAGCCTCAAAAATAG 1860 0.422 MHTPKTRSSTSEVPQKVSPRAVRQLRTTTTLDTISVSSSSTQASKISKERSPKVADRKSPRSPVPERKRPSKISELESQISQLKGDLNKVKDQLILSESCKKQAQQDAEESKEQLSILSAKLEESQKQYLELCATGEARDIELQRITEERDRAWQSELEASQKHLSVDSTALASAVNEIQLLKAQLELVANYESVQTQHAESADKELLNLKQNLSESLSLMENMKNQLKNCKESESQTQDVVDETLLQLESAKRTVEILRDDVTKDIAGYNSVSSELEQSRARVNTLATLVSKLKTRVNDNERIHSDQYLVDDRKFEKEREILKDGEDPNQIEEEICSLKSEVGRLTSALEISEAKYQEEQIQSTVQIKNAYELMEQIKSESGQKQCELEAELQRKKTDIEELKANLMDKETELQGIMEENDNLNSKLEKSMSSQNEHGINKELKRLEQCVDELKADMMDKETTLQSISEENETLKLEISKSCSDGGKASEEMERAKAAEHEAVTKLGIVMEEADRSNRKAARVTEQLEAAQAASSEMEGELRRLKVQSDQWRKAAEAAAAMLSAGNNGKLTERSVSLDNNNNYKCSSPYAEDIDDDFQRKKNGNMLKKIGVLWKKPQK* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1743 619 Coils Coil 242 262 - -
Tpr4g1743 619 Coils Coil 73 93 - -
Tpr4g1743 619 Coils Coil 511 548 - -
Tpr4g1743 619 Coils Coil 437 478 - -
Tpr4g1743 619 Coils Coil 101 128 - -
Tpr4g1743 619 MobiDBLite consensus disorder prediction 49 74 - -
Tpr4g1743 619 Coils Coil 390 427 - -
Tpr4g1743 619 Coils Coil 207 234 - -
Tpr4g1743 619 MobiDBLite consensus disorder prediction 1 48 - -
Tpr4g1743 619 MobiDBLite consensus disorder prediction 1 75 - -
Tpr4g1743 619 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 619 IPR029688 -
Tpr4g1743 619 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 1 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1743 Tpr-Chr4 17992109 17998549 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1743 - - mtr:MTR_4g461060 959.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1743 4 17992109 17998549 Tpr4g1743 4 17992109 17998549 ECH
Tpr7g4349 7 52249506 52252436 Tpr4g1743 4 17992109 17998549 PCT