Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1732 ATGTCGGCACCGCAAAGACTTCTACTACTCTCCAATCTCTCCCACATTCTCCCACCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCAAATCTAGAACCTTCTTTTTCCTTCCATTCTCTCAATCTTCCTCACTCTCACTATCAATGCCTCGCAATCAGCGAAGTGGAGGTTACCGCGGAGAACAGAGATGGAAAGAGAAACCTAAAACTGAACCGCAAGTATCGGCTATTGGAGATGCGGAAACCGTTACTAACAAACTTTCTGGAATTCATATTGGTGAATCTACCGTGGTTCACCATGGTAATAAGGTTACTTCAACGGCAATTTGGAAACCGAAATCTTATGGAACTGTTAGTGGAGGAGCAACTGTAACTGAACTTGAAAGCACGCCAGGTGTTGGTGGTGTTGAGGTGGCTTCAAGTTCAACTCAGAAGGGTAATGGTAGTGCTAGTTTGAGTAACTCATTTCGCAGTAATCTGTTGGAGAATTTTACTGTGGATAATTCCACTTATGCTCATGCGCGAATCAGGGCGTCTTTTTACCCCAAATTTGAAAATGAAAAGTCTGATCAAGAGACAAGGTCAAGGATGATTGAGTTGGTATCAAAAGGTTTGGCTACATTAGAGGTTTCACTTAAACACTCTGGCTCTCTTTTTATGTATGCCGGTCATGAGGGTGGAGCTTATGCAAAAAACAGTTTTGGAAATATATATACTGCTGTTGGTGTATTTGTTCTTGGGCGAATGTTTTGCGAGGCTTGGGGAACTGAAGCTTTAAAAAAGCAGGCTGAATTTAATAATTTTCTTGAGAGAAACCATATGTGCATATCAATGGAATTAGTAACTGCTGTTCTTGGAGACCATGGACAGCGTCCTCATGAAGACTATGTGGTGGTTACAGCAGTTACTGAATTGGGCAATGGAAAGCCAAAGTTCTATTCAACCCCTGAGATAATCTCTTTTTGCAGAAAATGGCGATTACCAACAAATCACGTGTGGTTGTTCTCAACAAGGAAATCAGCCTCTTCCTTCTTTGCTGCGTATGATGCCTTATGTGAGGAAGGTACTGCAACTTCTGTATGCAGGGCTCTTGATGAAATTGCGGACGTATCTGTACCAGCTTCAAAAGACCATGTGAAAGCCCAAGGTGAAATTTTAGAGGGTCTTGTAGCTCGTCTTGTGAGCCATGAGAGTTCAAACCATATGGAGAAAATTTTGAAGGAATTTCCCCCTCCACCTGCTGATGGAGCTACCCTCGATTTCGGTCCAAGTCTTAGGGAAATTTGTGCTGCCAATAGATCTGATGAAAAACAGCAAGTGAAAGCGCTTCTTGAGAGTGTTGGTAGCTCATTTTGTCCTGATTACTCAGATTGGTCTGGTACCGATGCTTCTGATGTTCATTCAAGAAATGCGGACAAATCTGTTCTTCCAAAGTTTTTACAAGCTCATCCGACAGACCATTCAACTAAAAAGTTGCAGGAAATAATTCGGTTGATGAGGGAAAAACGCCTCCCTGCTGCATTCAAATGTTATCATAACTTCCACAAAGTTGATGCCATATCAAAAAACAACCTTTTCTATAAAATGGTCATTCATGTGCACAGTGATTCTGCTTTTCGGAGATACCAAAATGAGATGAGGAAACAACCAGGATTATGGCCACTTTATCGAGGATTTTTTGTTGATATCAATTTATTCAAGGCAGACAAAGAGAAAGTCGCTGGAATTTCTAAGAACAGTATAAATGAAAGTGGTAGCACCGGTACTGAAAAAGATGATTTTGCTGACGAAGATGCAAATTTAATGGTCAAATTGAAGTTTCTTACGTATAAGCTGCGAACCTTTCTCATTCGAAATGGATTGCCAATTCTGTTTAAAGAAGGTACAGGTGCTTACAAGGCATATTACTTGAGACAAATGAAAAAATGGGGAACCTCTCCTGGAAAGCAAAGAGAACTTACCAAAATGCTTGATGAATGGGCTCTGTATATAACAAGAAAGTGTGGAAAAAGGCAACTTTCATCATCAATATATCTTGGTGAAGCTGAACCTTTCCTTGAACAGTTTGCAAAACGTAGTCCACAGAACCAATCTCTAGTAGGTTCTGCTGGTAATTTAGTTAGGACCGAAGATTTCTTGGCCATTGTTGAGGGCGGCCAGGATGAAGAAGGTGATCTTGTATCAGAGCGGGATATAACACCATCAGGGCCTAATATCTCAGTCAGAGACACAGTTCCAAAAGATGAAGGGATGATTGTATTCTTTCCCGGAATACCAGGTTGTGCAAAGTCTGCCATTTGCAAAGAATTGCTAAATGCACAGGGAGGACTACTAGGAGATGATCGACCCGGTCATAGTCTCATGGGTGATCTAATTAAAGGAAAATATTGGCAGAAAGTCGCTGAAGAGCGCAAAAAGAAACCGAAGTCTATAATGCTTGCTGACAAGAATGCCCCAAATGAAGAAGTTTGGAGACAGATAGAAGACATGTGTCACAGAACCAGGGCATCTGCTGTCCCAGTTGTGCCTGAATCTGAAGGAACTGATTCAAATCCATTTTCCCTTGATGCTTTAGCTGTCTTCATGTTTCGTGTGCTTCAACGAGTCAATCATCCAGGAAATCTTGACAAGGCATCTCCAAATGCAGGCTATGTGCTGCTAATGTTCTATCACCTTTATGATGGCAAGAGCCGCAAAGATTTTGAGGGTGAATTAATTGACCGTTTTGGGTCACTTGTGAAGATCCCATTATTGAAATCCGATAGGAATCCCCTTCCCGAGGCAGTGCAGTGCATTTTGGAGGAAGGAATCAATCTATATAAGCTTCACACTAAAAGACATGGAAGGTTAGAATCTACCAAGGGTACGTACGCAAAGGAATGGATGAAATGGGAGAAACAATTACGGGATATTCTTTTTGGAAATGCTGATTATCTTAATACAGTCCAGGTTCCATTCGAGTTAGCTGTCAAGGAAGTGTCGGAACAATTGAGAAACATTGCTAAGGGAGATTACAAGCCTCCAGATACTGAAAAGAGGACGTTTGGTACCATTGTTTTTGCTGCTCTCAGTCTGCCAGTAATAGAAATTCAAGGTGTCCTAAATAATTTAGCCAAGAATAATCCGAAGATTGACGAATTCCTTAAAGATAAGCATCTAGAGAATCTTAATCGAGCTCACTTGACTCTTGCCCATAAAAGAAGTCATGGCATCAAAGCTGTCGCTGATTATGGTCTGTGGCTACATAAAAAGGCACCAGTGGAGTTGACGGCACTGCTCTACTCAGATAAAATGGCTGCGTTCGAAGCTTTTCCTGGCTCAGTGGAAGGAGAGAAGATAGTTCCGAAAAATACGTGGCCCCATATTACCTTGTGGACTAGTCAAGGGGTTTCAGCCAAGGATGCCAACATGTTACCACAGTTGTTTGCAGAGGGGAAAGCAAATCGGATAGACTTAAATCCTCCCATCAATGTGTCTGGCACAGTTGAGTTTTATTGA 3498 0.416 MSAPQRLLLLSNLSHILPPSSSSSSSSSFKSRTFFFLPFSQSSSLSLSMPRNQRSGGYRGEQRWKEKPKTEPQVSAIGDAETVTNKLSGIHIGESTVVHHGNKVTSTAIWKPKSYGTVSGGATVTELESTPGVGGVEVASSSTQKGNGSASLSNSFRSNLLENFTVDNSTYAHARIRASFYPKFENEKSDQETRSRMIELVSKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFCEAWGTEALKKQAEFNNFLERNHMCISMELVTAVLGDHGQRPHEDYVVVTAVTELGNGKPKFYSTPEIISFCRKWRLPTNHVWLFSTRKSASSFFAAYDALCEEGTATSVCRALDEIADVSVPASKDHVKAQGEILEGLVARLVSHESSNHMEKILKEFPPPPADGATLDFGPSLREICAANRSDEKQQVKALLESVGSSFCPDYSDWSGTDASDVHSRNADKSVLPKFLQAHPTDHSTKKLQEIIRLMREKRLPAAFKCYHNFHKVDAISKNNLFYKMVIHVHSDSAFRRYQNEMRKQPGLWPLYRGFFVDINLFKADKEKVAGISKNSINESGSTGTEKDDFADEDANLMVKLKFLTYKLRTFLIRNGLPILFKEGTGAYKAYYLRQMKKWGTSPGKQRELTKMLDEWALYITRKCGKRQLSSSIYLGEAEPFLEQFAKRSPQNQSLVGSAGNLVRTEDFLAIVEGGQDEEGDLVSERDITPSGPNISVRDTVPKDEGMIVFFPGIPGCAKSAICKELLNAQGGLLGDDRPGHSLMGDLIKGKYWQKVAEERKKKPKSIMLADKNAPNEEVWRQIEDMCHRTRASAVPVVPESEGTDSNPFSLDALAVFMFRVLQRVNHPGNLDKASPNAGYVLLMFYHLYDGKSRKDFEGELIDRFGSLVKIPLLKSDRNPLPEAVQCILEEGINLYKLHTKRHGRLESTKGTYAKEWMKWEKQLRDILFGNADYLNTVQVPFELAVKEVSEQLRNIAKGDYKPPDTEKRTFGTIVFAALSLPVIEIQGVLNNLAKNNPKIDEFLKDKHLENLNRAHLTLAHKRSHGIKAVADYGLWLHKKAPVELTALLYSDKMAAFEAFPGSVEGEKIVPKNTWPHITLWTSQGVSAKDANMLPQLFAEGKANRIDLNPPINVSGTVEFY* 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1732 1165 MobiDBLite consensus disorder prediction 47 74 - -
Tpr4g1732 1165 MobiDBLite consensus disorder prediction 58 72 - -
Tpr4g1732 1165 PANTHER TRNA LIGASE 1 106 1149 IPR038837 GO:0003972|GO:0006388
Tpr4g1732 1165 PANTHER TRNA LIGASE 1 106 1149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1732 Tpr-Chr4 17861834 17881494 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1732 - - gmx:100815563 1870.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1732 4 17861834 17881494 Tpr4g1732 4 17861834 17881494 ECH