Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr4g1722 | ATGGCGAGAAGCGCCTCTCAATCATCCCAATCGGCATCATCCGCCGCCACGACACGACCAGGTGTAATGGCACCACGCGGCTCCGCTGCCGCTACAGCCGGAATGCGTCGTCGTCGTCTCGGAGGTGGAAACACAACCAGCTCAAGCTCTGCCGGAGGAGGATCCAGCGGCGGAAATAACATGCTTCGATTCTACACCGACGATGCACCTGGCTTGAAGATTTCACCAACGGTTGTTCTCGTAATGAGTCTCTGTTTCATTGGATTCGTCACCGCTCTTCATGTTTTTGGTAAACTCTACCGTTATCGATCTGCCGCTGGTGCTGGCGCTTGA | 333 | 0.5526 | MARSASQSSQSASSAATTRPGVMAPRGSAAATAGMRRRRLGGGNTTSSSSAGGGSSGGNNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRYRSAAGAGA* | 111 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr4g1722 | 110 | PANTHER | SEC61 SUBUNIT BETA | 1 | 106 | IPR030671 | GO:0005784|GO:0006886 | |
| Tpr4g1722 | 110 | PANTHER | PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA | 1 | 106 | - | - | |
| Tpr4g1722 | 110 | Pfam | Sec61beta family | 58 | 97 | IPR016482 | - | |
| Tpr4g1722 | 110 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
| Tpr4g1722 | 110 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Tpr4g1722 | 110 | MobiDBLite | consensus disorder prediction | 41 | 58 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr4g1722 | Tpr-Chr4 | 17734004 | 17735500 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr4g1722 | K09481 | - | csv:101211539 | 122.094 |
Event-related genes