Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1719 ATGCATCAAACTAGTACTCATTGCTACTACAATTCTTATCTTTTCCATTCATTTGCAATAAGCCTTAACATTCATCAAAACCACAAAATGATGTTGAAGAAGCAATCTCATATCTTGTCCTTCTCATTGGCAATAGTAGTTTCCCTCTTGTACTCTACCACGATAACTTTATCGCAATTATCACCTGCTAATGCTCCGATAAAACCAACCCTACCTTCCCCGACAGTACCAGCCGCAGCCCCGAAACCATTGGTTCCCTCATTACCACAATCACCTTCACCCACCGATGCCACGCCTGACACTCCAAGCGTTGACATTGTTGGAATCCTGAGGAAGGCCAAGTCATTCAACGTCCTAATCCGACTCATGAAAACAACTCAATTGACTAACCAACTAAATTCACAACTATTGACTATCAAATCAGGTGGATTAACAATTCTTGCACCAGATGACAACGCCTTCTCAGGACTCAAAGCAGGATTTCTCAACTCTCTTTCCGATGGACAAAAACTCGAGTTGTTACAGTTCCACGTTATTTCAGACTACGTATCTAGCTCAAACTTCGACACTTTGACAAACCCTGTTAGAACACTTGCTGGAGCTAAACCCGGAAAGGTGGAATTAAATGTGATTAGTTATGGTGGAAGTGTGAACATATCGACAGGGGAAGTCAACACTACAATTGACGGCATTATATATACCGATAAACATCTCGCTATTTATAAAGTTGGTAAAGTACTACTTCCTACAGAATTCTTTTCCGTTGCTAAGGCACCGGGGAAGGCACCATCTTTGGCACCAGAACCTTCAGCATTGACTCCAAAAGCCGATAAGGAGAAACCATCATCAGCAGATTCCTCAGATTCATCATCTCAGGTTAAGCCTTCGAATGATAGTTCTGGTACTGCGAAAATCAACGTGAATGGAAAGTGGATTTCCATTGTTCTTGGTCTTGGAATTGTTATCTTAACTTCACGTTGA 981 0.4159 MHQTSTHCYYNSYLFHSFAISLNIHQNHKMMLKKQSHILSFSLAIVVSLLYSTTITLSQLSPANAPIKPTLPSPTVPAAAPKPLVPSLPQSPSPTDATPDTPSVDIVGILRKAKSFNVLIRLMKTTQLTNQLNSQLLTIKSGGLTILAPDDNAFSGLKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTIDGIIYTDKHLAIYKVGKVLLPTEFFSVAKAPGKAPSLAPEPSALTPKADKEKPSSADSSDSSSQVKPSNDSSGTAKINVNGKWISIVLGLGIVILTSR* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1719 326 ProSiteProfiles FAS1/BIgH3 domain profile. 103 232 IPR000782 -
Tpr4g1719 326 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 37 315 IPR045003 -
Tpr4g1719 326 SUPERFAMILY FAS1 domain 94 250 IPR036378 -
Tpr4g1719 326 MobiDBLite consensus disorder prediction 285 301 - -
Tpr4g1719 326 MobiDBLite consensus disorder prediction 264 301 - -
Tpr4g1719 326 Pfam Fasciclin domain 115 249 IPR000782 -
Tpr4g1719 326 Gene3D FAS1 domain 88 250 IPR036378 -
Tpr4g1719 326 SMART fasc_3 145 250 IPR000782 -
Tpr4g1719 326 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 37 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1719 Tpr-Chr4 17702722 17703984 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1719 - - gmx:100790242 391.349