Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1716 ATGATTAGAATTCAATCTCTCTTATCCTTCTCAATTGCAATACTAGTTTCACTCTTGTGTTCCACCACCACAACTTTATCTCAATTATCACCAGCTAAAGCTCCAATTCAACCTACACTACCTTCCCCAACACAACCAGCTGCAGCCCCTAAACCATTGGTACCATCATTACCAGAGTCACCCAGTGATTCTACACCCGACACTACAGGCGCGGTTGACATCGTTGGAGTCCTCCGAAAGGCCAAGTCATTCAATGTCTTAATCCGATTGATGAAAACAACTCAATTGATCAACCAACTCAATTCACAACTATTGACTATCAAAACAGGTGGATTAACCATTCTCGCGCCAGATGACAGCGCCTTCTCAGGACTCAAAGCAGGATTCCTCAACTCTCTTTCCGATGGACAGAAACTCGAGTTATTACAATTCCACGTTATTTCGGACTATGTATCTAGCTCAAATTTTGATACTCTAACCAACCCTGTGAGAACACTTGCCGGTGCCAAACCCGGAAAGGTTGAGCTAAATGTGATAAGTTACGGTGGAAGCGTGAACATATCGACAGGAGAAGTGAACACTACAATCAATGGCATTATATATACTGATAAGCATCTTGCTATTTATAAAGTTGGCAAGGTGCTTCTTCCTACAGAATTCTTTTCCGTTGCTAAGGCACCGGGAAAGGCGCCTTCTTTGGCACCAGAACCTTCAACTGATACAGCAAAGGCGCCTAAAACCGATAAGGATACATCCTCAGATTCGTCGCAGGTAATTAATCCAACAGAAGACAAATCTGGCTCTGTGAAGGTTATGTGTGGAAAGTTTGTGTCAGTTGGACTTGTATTAGGTTTGGTGGCTATGATGCAAACTTGA 876 0.4292 MIRIQSLLSFSIAILVSLLCSTTTTLSQLSPAKAPIQPTLPSPTQPAAAPKPLVPSLPESPSDSTPDTTGAVDIVGVLRKAKSFNVLIRLMKTTQLINQLNSQLLTIKTGGLTILAPDDSAFSGLKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTINGIIYTDKHLAIYKVGKVLLPTEFFSVAKAPGKAPSLAPEPSTDTAKAPKTDKDTSSDSSQVINPTEDKSGSVKVMCGKFVSVGLVLGLVAMMQT* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1716 291 MobiDBLite consensus disorder prediction 35 69 - -
Tpr4g1716 291 Pfam Fasciclin domain 83 217 IPR000782 -
Tpr4g1716 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 290 - -
Tpr4g1716 291 MobiDBLite consensus disorder prediction 36 59 - -
Tpr4g1716 291 Gene3D FAS1 domain 57 218 IPR036378 -
Tpr4g1716 291 MobiDBLite consensus disorder prediction 227 266 - -
Tpr4g1716 291 ProSiteProfiles FAS1/BIgH3 domain profile. 71 206 IPR000782 -
Tpr4g1716 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 290 IPR045003 -
Tpr4g1716 291 SUPERFAMILY FAS1 domain 71 218 IPR036378 -
Tpr4g1716 291 SMART fasc_3 113 218 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1716 Tpr-Chr4 17688873 17690109 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1716 - - gmx:100794280 413.305