Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1715 ATGAAACAAGTAACTCACTTTTTCTTCTTTTTCTCACTTTTTCTTCTCTTTTCTACCACCTTATCAGTTTCACAAGCACCTGCATCATCCCCAAAATCCTCAACAAAAACTCCCACAGCACCATCACCAAAACCATTAGTCCCTAAATTACCTGAATCACCAGACTCGACAGATTCAGTCCCGGACGACATCACAAGAATCCTTGTAAAGGCGAAAACATTCTCCGTCCTAATCCGTCTCCTAAAATCAACAGAAATCATGAGTAGCATAAACTCACAGCTCATCACAGCCAAAACCGGCGGCTTAACAATCCTTGCACCGGACGATTCTGCTTTTTCAAGCCTCAAAGCCGGGTTCCTTAATTCCTTAGACGAAAACAAAAAAATCGAACTTTTACAATTCCACATCTTACCCCAATACGTAGCCAGCTCAAATTTCGATTCTTTAAGCAACCCTGTTCAAACGGTAGCCGGTAAAGACCCAACAAGGCTTCCACTTAATGTTAATGCATTAGGTAACAGTGTTAATATTTCAACTGGTGTTGTTAATGCTTCCATTGTTGGCATTGTTTACTCCGATAACAAGCTCGCAATTTATCGACTGGATAAAGTGCTTCTTCCTCTTGATTTCTTTAAAACTAAAGCACCTGCTTTGGCTCCATCACTTGCTGCTAGTGCTAAGGCTCCTAAAGCTGCTAAGGAGATTTCTTCAAGTGATGATCAAGATGAAAATGATCAGGATCATGGTAAATCTGGAACAGAGAGATTATGTGGATTTCTTGGAACAACGTTGGTGTCTCTTGTTGTTGTTGTCACAATGATGTGA 825 0.4061 MKQVTHFFFFFSLFLLFSTTLSVSQAPASSPKSSTKTPTAPSPKPLVPKLPESPDSTDSVPDDITRILVKAKTFSVLIRLLKSTEIMSSINSQLITAKTGGLTILAPDDSAFSSLKAGFLNSLDENKKIELLQFHILPQYVASSNFDSLSNPVQTVAGKDPTRLPLNVNALGNSVNISTGVVNASIVGIVYSDNKLAIYRLDKVLLPLDFFKTKAPALAPSLAASAKAPKAAKEISSSDDQDENDQDHGKSGTERLCGFLGTTLVSLVVVVTMM* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1715 274 ProSiteProfiles FAS1/BIgH3 domain profile. 61 205 IPR000782 -
Tpr4g1715 274 SUPERFAMILY FAS1 domain 41 208 IPR036378 -
Tpr4g1715 274 Gene3D FAS1 domain 49 207 IPR036378 -
Tpr4g1715 274 SMART fasc_3 103 208 IPR000782 -
Tpr4g1715 274 Pfam Fasciclin domain 73 207 IPR000782 -
Tpr4g1715 274 MobiDBLite consensus disorder prediction 27 58 - -
Tpr4g1715 274 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 269 IPR045003 -
Tpr4g1715 274 MobiDBLite consensus disorder prediction 233 252 - -
Tpr4g1715 274 MobiDBLite consensus disorder prediction 230 252 - -
Tpr4g1715 274 PANTHER FASCICLIN DOMAIN PROTEIN 9 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1715 Tpr-Chr4 17685090 17686238 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1715 - - gmx:106794109 326.635