Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1712 ATGTTTACTTATATTTATACTACTACATGCATCAACACACTCACTTTAAAAATCACCCTTCTATTTTCCACTCCTTTCTCACAAAATATGGTGATGATGAAACATCATATTCTTTCTCTCCCACTTCTTGTAATGATTTTTTGCTCTTCCACTACCATTTTAGCTCAGAAAACACCTGCTCCGGCACCAGAGGATGCAGGCCCAACAGACATTATCAGAATCCTCAAAAAGGCCGGAGGGTACACCACGCTAATCCGTCTTCTCCAGACAACACAAGTGTCCACCCAAATCGACTCTCAACTCTTAAACTCGAACGGTGGTTTAACCTTGTTTGCGCCGAATGACAATTCTTTTTCGAGCCTTAAACCTGGTTTTCTCAATTCGCTTAGCGATGAACAAAAGAACAAGTTGATCCAATTCCACTTGCTACCTACATTTGTATCCACGGCAAATTTCGATACTTTGAGCAACCCTGTGAGAACACAAGCTGGTGATGACACTTTTAGGTTGGGACTGAATGTAACAAGTTCAGGAAACCAAGTGAACTTAACAACAGGTATTGTGAATGCCACGGTTGGCGGCACTGTTTACACCGATCGCCAGCTCGCGGTTTATGAAGTCGACAAAGTGCTTCTTCCTCGCGATTTCTTTGTTGCTAAACCTCCAGCACCGGCTCCAGCACCTGAAAAAGCTAAGGCATCGTCGTCTAAGAAGAAATCTGCTGATAACGATGTAGTTGCAGGAGACGATGATTCTACTTCTGCTGCTAGTGTGAAACAGCGGTGTCTCATTTCTGTTCCTGTTGCAGTTGCTACAATTATAGTAGCATTATTTTCATGGTGA 843 0.4282 MFTYIYTTTCINTLTLKITLLFSTPFSQNMVMMKHHILSLPLLVMIFCSSTTILAQKTPAPAPEDAGPTDIIRILKKAGGYTTLIRLLQTTQVSTQIDSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSTANFDTLSNPVRTQAGDDTFRLGLNVTSSGNQVNLTTGIVNATVGGTVYTDRQLAVYEVDKVLLPRDFFVAKPPAPAPAPEKAKASSSKKKSADNDVVAGDDDSTSAASVKQRCLISVPVAVATIIVALFSW* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1712 280 MobiDBLite consensus disorder prediction 223 250 - -
Tpr4g1712 280 SUPERFAMILY FAS1 domain 68 214 IPR036378 -
Tpr4g1712 280 MobiDBLite consensus disorder prediction 232 246 - -
Tpr4g1712 280 Pfam Fasciclin domain 80 213 IPR000782 -
Tpr4g1712 280 SMART fasc_3 109 214 IPR000782 -
Tpr4g1712 280 ProSiteProfiles FAS1/BIgH3 domain profile. 68 211 IPR000782 -
Tpr4g1712 280 Gene3D FAS1 domain 44 214 IPR036378 -
Tpr4g1712 280 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 30 275 IPR045003 -
Tpr4g1712 280 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 30 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1712 Tpr-Chr4 17665133 17666700 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1712 - - gmx:100791643 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1712 4 17665133 17666700 Tpr4g1712 4 17665133 17666700 ECH