Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1710 ATGAGAGTGACACAAATTGTGTTGGGTTTGGTTTGGTTTCTTGGTGTTTATGTACTTGCTTCTTTTTGTTCCAATGTTACCTATGATCATAGAGCATTGGTCATTGATGGCAAACGCAGGGTCTTAATCTCTGGTTCTATTCATTATCCTCGTAGCACTCCACAGATGTGGCCAGACCTTATTCAGAAATCCAAAGATGGAGGAATTGATGTGATTGAGACTTATGTTTTTTGGAACTTACATGAACCGGTTCGAGGCCAGTATAATTTTGAAGGAAGGGGGGATTTGGTTGGATTTGTGAAAGCAGTAGCAGCAGCAGGTCTATATGTTCATCTCCGGATCGGTCCATACGCGTGTGCTGAATGGAATTACGGTGGTTTCCCTCTTTGGTTGCATTTTATTCCTGGAATTAAGTTCAGAACTGATAATGAACCATTCAAGGCAGAAATGAAGCGATTTACCGCGAAGATTGTGGATTTAATGAAGCAAGAGAATCTCTATGCATCACAAGGTGGACCAATTATTTTATCTCAGATTGAAAACGAGTATGGAGACGTCGATTCACACTATGGTCCTGCGGCTAAACCCTACATCAATTGGGCAGCATCAATGGCTACATCTCTTGATACAGGTGTTCCTTGGGTTATGTGCCAGCAGGCAAATGCACCTGATCCAATTATAAACACATGCAATGATTTTTACTGCGATCAATTCACGCCAAACTCTGACAAGAAACCAAAAATGTGGACCGAGAATTGGAGTGGATGGTTTCTTGCATTTGGAGGTGCTGTACCTTATAGACCTGTGGAAGATCTTGCATTTGCTGTTGCACGTTTTTTTCAACGGGGTGGAACTTTTCAAAATTACTACATGTACCATGGAGGGACTAACTTTGGTCGAACAACCGGTGGACCTTTTATTTCTACGAGTTATGATTATGATGCACCCATCGATGAGTATGGAATTATTAGACAGCCCAAATGGGGCCATCTTAAAGATTTGCATAAGGCCATAAAGCTTTGTGAAGAAGCACTGGTAGCTACTGATCCAACAATTTCATCTCCTGGTCCAAATCTAGAGACTGCAGTTTACAAGACAGGATCTGTATGTGCTTCCTTCCTTGCCAACACCGGCACGTCTGATGCAACGGTTACCTTTAATGGAAATTCATATCACTTGCCTGGATGGTCTGTGAGCATCTTACCGGACTGCAAGAATGTTGTACTCAATACTGCAAAGATTAATTCTGCATCTACGATTTCGAGTTTCGCAACTGAATCCTCCAAAGAAGAGGTTGATTCTTTGGACGGTTCAAGTTCAGGATGGAGTTGGATTAGTGAACCGGTTGGTATTTCAAAGGCTGATGCATTCGCAAAACCTGGACTACTCGAGCAAATAAATACGACGGCTGATAGAAGTGACTACTTGTGGTACTCATTAAGCCTTGTTGCTGAAGAAGATGCCGGTGAACAACCTGTACTTCACATTGAATCCCTTGGTCATGCCCTTCATGCTTTTATAAATGGGAAACTTGCAGGGAGTAAAGCAGGCAACAGCGGAAACGCTAAGGTCAATGTGGACATCCCTATTACAGTTGTAGTTGGAAAGAACACGATCGATCTCCTGAGTTTAACAGTGGGATTACAGAACTATGGAGCTTTTTATGACACAGTAGGTGCGGGGATCACTGGTCCGGTAATATTGAAATTTCCGAAAAATGGCAGTACCGCTGATCTCTCGTCACTGCCGTGGACATATCAGGTTGGCCTTCAAGGTGAAGATTTAGGTCTGTCTAGTGGAAGTGTTGGACAGTGGAATTCACAATCCACCTTACCTACAAATCAACCTTTGACTTGGTACAAGACGAATTTTGTTGCTCCCTCCGGCAGTAACCCGGTTGCAATTGACTTCACGGGGATGGGAAAAGGCGAAGCTTGGGTGAACGGACAGAGCATCGGGAGATATTGGCCAACATATGTCGCACCAAATTCTGGTTGTACCGACTCATGCAATTATAGAGGAGCCTATTCTGCAAACAAATGTCTCAAGAACTGTGGAAAACCATCACAGACATTATATCATGTACCGCGGTCATGGTTGAAACCAGACAGCAACACTCTTGTATTGTTTGAGGAAAGCGGAGGCGACCCTACAAAAATATCTTTCGCTACAAAACAAATAGAAAGTGTTTGTTCACATGTATCCGAATCTCACCCTCCACCTGTAGACACGTGGAATTCGGATACAGATTCAGTAAGAAAGGTAGGTCCTGTACTGTCACTCGAATGCCCTTATCCTAATCAGGTGATCTCTTCCATTAAATTTGCAAGCTTTGGAACGCCCCTTGGAACTTGCGGAAACTTCAACCATGGACACTGCAATAGCAATAGGGCTTTATCCATTGTGCAGAAGGCCTGCATTGGATCAAGCAGTTGTAGTATTGGAGTATCAATTAATACATTTGGAAATCCATGTAGAGGAGTAACAAAGAGTTTAGCTGTTGAAGCTGCTTGTACATAG 2520 0.4302 MRVTQIVLGLVWFLGVYVLASFCSNVTYDHRALVIDGKRRVLISGSIHYPRSTPQMWPDLIQKSKDGGIDVIETYVFWNLHEPVRGQYNFEGRGDLVGFVKAVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIKFRTDNEPFKAEMKRFTAKIVDLMKQENLYASQGGPIILSQIENEYGDVDSHYGPAAKPYINWAASMATSLDTGVPWVMCQQANAPDPIINTCNDFYCDQFTPNSDKKPKMWTENWSGWFLAFGGAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFGRTTGGPFISTSYDYDAPIDEYGIIRQPKWGHLKDLHKAIKLCEEALVATDPTISSPGPNLETAVYKTGSVCASFLANTGTSDATVTFNGNSYHLPGWSVSILPDCKNVVLNTAKINSASTISSFATESSKEEVDSLDGSSSGWSWISEPVGISKADAFAKPGLLEQINTTADRSDYLWYSLSLVAEEDAGEQPVLHIESLGHALHAFINGKLAGSKAGNSGNAKVNVDIPITVVVGKNTIDLLSLTVGLQNYGAFYDTVGAGITGPVILKFPKNGSTADLSSLPWTYQVGLQGEDLGLSSGSVGQWNSQSTLPTNQPLTWYKTNFVAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYVAPNSGCTDSCNYRGAYSANKCLKNCGKPSQTLYHVPRSWLKPDSNTLVLFEESGGDPTKISFATKQIESVCSHVSESHPPPVDTWNSDTDSVRKVGPVLSLECPYPNQVISSIKFASFGTPLGTCGNFNHGHCNSNRALSIVQKACIGSSSCSIGVSINTFGNPCRGVTKSLAVEAACT* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1710 839 Gene3D - 572 666 - -
Tpr4g1710 839 Gene3D - 681 734 - -
Tpr4g1710 839 SUPERFAMILY (Trans)glycosidases 25 342 IPR017853 -
Tpr4g1710 839 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Tpr4g1710 839 Gene3D Glycosidases 20 341 - -
Tpr4g1710 839 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Tpr4g1710 839 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Tpr4g1710 839 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Tpr4g1710 839 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Tpr4g1710 839 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Tpr4g1710 839 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Tpr4g1710 839 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Tpr4g1710 839 PRINTS Glycosyl hydrolase family 35 signature 615 629 IPR001944 GO:0004553|GO:0005975
Tpr4g1710 839 PRINTS Glycosyl hydrolase family 35 signature 642 658 IPR001944 GO:0004553|GO:0005975
Tpr4g1710 839 SUPERFAMILY Galactose-binding domain-like 398 569 IPR008979 -
Tpr4g1710 839 Pfam Galactose binding lectin domain 761 838 IPR000922 GO:0030246
Tpr4g1710 839 SUPERFAMILY Galactose-binding domain-like 584 749 IPR008979 -
Tpr4g1710 839 Pfam Beta-sandwich domain in beta galactosidase 345 414 IPR041392 -
Tpr4g1710 839 PANTHER BETA-GALACTOSIDASE 8 833 - -
Tpr4g1710 839 PANTHER BETA-GALACTOSIDASE RELATED 8 833 IPR001944 GO:0004553|GO:0005975
Tpr4g1710 839 Pfam Glycosyl hydrolases family 35 33 337 IPR031330 -
Tpr4g1710 839 Gene3D - 413 570 - -
Tpr4g1710 839 Gene3D - 748 839 IPR043159 -
Tpr4g1710 839 ProSiteProfiles SUEL-type lectin domain profile. 753 839 IPR000922 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1710 Tpr-Chr4 17628987 17639928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1710 20 692 Glycoside Hydrolase AT2G28470 75.735 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1710 - - gmx:100793198 1513.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1710 4 17628987 17639928 Tpr4g1710 4 17628987 17639928 ECH