Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1708 ATGGCTGGAAGAAAATGGAGCATCTTGGTGGCCTTAGTTATCATACTTATCTCTATGGATGCTGCCATTGCTCAAGGCCAAGGAAATGGTAACGGTAACGGAAACAATGGTAATGGTAATGGTAATAATAACGGTAACAATGGTAATGGTAAGGGAGATGATAAGGAAGAAGGGAAGAAGGAGAAGGAGAAGAAGGAGAAAAAGGAGAAAGAACCGAAAAAGAAGAAGAGTCCAAAAGAGGAATCGTCAAATTATCAACAGTTGCCGAATCTGCCATCAGGACAGGAGCGAGCGTTTTGCAAAGCAAACACTACTTGTCATTTCGCGACTCTTGTGTGTCCAGCCGAGTGCCAAACTAGGAAGCCAAAGAAGAACAAGAAGGCGAAAGGTTGTTTCATTGATTGCAGCAGCAAATGTGAAGCCACTTGCAAGTTTAGAAGAGCAAACTGTGACGGCTATGGTTCATTGTGCTATGATCCTCGATTTGTTGGTGGAGACGGTGTGATGTTCTATTTCCACGGAGCCAAGGGAAGAAACTTTGCCATAGTTTCAGATGACGAATTCCAAATCAACGCACACTTCATCGGTACTCGACCACAGGGAAGGACTCGCGACTACACATGGGTGCAAGCACTTTCTGTCATGTTCGATACACACACTCTTGTTATTGCAGCCAATAGAGTAACTCAATGGAATGACAATGTTGACTCTCTTACAGTAAAATGGGACGGTGAATCAGTAACCATTCCTACCGACGGTGACGCTGAATGGAAGATTACAACCGATGAAAGAGAAGTGGTTGTGGAGAGAACAGATGATACAAACAGTGTTAGAGTCACAGTTTCTGGTTTACTTGAAATGGACATTAGGGTAAGACCTATTGGAGAAAAAGAAAACAAAGCTCACAATTACCAATTACCATCAGATGATGCTTTTGCTCATTTGGAGACACAGTTCAAGTTTAAGAAACCTACAGATTTTATTGAAGGAGTTTTAGGTCAAACTTATAGGCCAAGTTATGTTAGTCCTGTGAAAAGAGGTGTTGCTATGCCAATGATGGGAGGAGAAGACAAGTACCAAACTCCATCTCTCTTTTCAACATCCTGCAAACTTTGCAGATTCCAAAGGCCTTCAACTAGCCAAGGACTAATTGCTCAATACTGA 1164 0.4227 MAGRKWSILVALVIILISMDAAIAQGQGNGNGNGNNGNGNGNNNGNNGNGKGDDKEEGKKEKEKKEKKEKEPKKKKSPKEESSNYQQLPNLPSGQERAFCKANTTCHFATLVCPAECQTRKPKKNKKAKGCFIDCSSKCEATCKFRRANCDGYGSLCYDPRFVGGDGVMFYFHGAKGRNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALSVMFDTHTLVIAANRVTQWNDNVDSLTVKWDGESVTIPTDGDAEWKITTDEREVVVERTDDTNSVRVTVSGLLEMDIRVRPIGEKENKAHNYQLPSDDAFAHLETQFKFKKPTDFIEGVLGQTYRPSYVSPVKRGVAMPMMGGEDKYQTPSLFSTSCKLCRFQRPSTSQGLIAQY* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1708 387 MobiDBLite consensus disorder prediction 50 81 - -
Tpr4g1708 387 PANTHER ROOT CAP/LATE EMBRYOGENESIS-LIKE PROTEIN 1 383 - -
Tpr4g1708 387 Pfam Root cap 318 374 IPR009646 -
Tpr4g1708 387 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 1 383 - -
Tpr4g1708 387 MobiDBLite consensus disorder prediction 36 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1708 Tpr-Chr4 17604042 17605676 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1708 - - lja:Lj3g3v3086010.1 550.821