Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1673 ATGATTTTTAGTCGAAATTCGACGTCGAGAAGTGGAGATTCCTTGGAAGGAATGTTGAATGACTATGTTGCCGGAAAGACGAAACCGAAACCTCTAAAATCTGGCTCTACAAAATTTGTTGCAGCTTTAACATGTCTTCAATTTTTCTTTGCAATATATGCAACATTTTTATTGTACTACATGGGTCCTTCAATTGATTTAAGAACAAAACCAGATTTCTCAAGAATTGCACAACAATGGAAACAACTTATGATCACACCACACATTGTAGGACATTACCAAGAAGCTTCATCTTCACTCATCCAAGAAACAAATCCATCTCTTGTTTGTGAGAATGAGAAAATAGATTTCTTGCAAAAGAAGTCAAATGATGTTCAAATGATCAAGATAAAAAGAGAGCTTTATGAAGAAGTTTTGAATTTCCAAACCAAAACCATTGGAACTGAAAATCTTCAAGAGCTAATGAAAATGAAATCCAAATGGGATTTAAATGTTCCAAATCCAACAAAACCGAAAATCAATGTTTTGTTAAACCATTTCAAGAGAAAAACACTTTGTGCTCAACTTGATTCTTTACTTCAACAAACACTTCCTTTTCATCAAGTTTGGGTGCTCTCGTTCGGCAGTCCAAACGAGGCCTCACTCAAGAGAATCGTCGAAAGCTATAACGATTCACGAATCAGTTTCATTAGCTCGAGTTACGATTTTAAGTACTATGGAAGGTTTCAAATGGCTTTACAAACAGAAGCTGATTTGGTTTATATAGTTGATGATGATATGATACCTGGAAGAAAAATGTTGGAGATTTTGGCACATGTAGCTGGAACTGAAAAGTATAAGAATTCTGTTTTGGGAAGTATTGGAAGGATATTGCCATTTAGACAGAAAGATTTTACTTTTCCAAGTTATAGGAAATTTAAGTCAAAAGAAGCTGGATTATATTTGCCTGATCCTGCTTATGATATCACTATTGATAAAATTGTGCAGGTTGATTTTCTTTCAAGTTCTTGGTTTTTGTCTGCTGAACTTGTTAAGACACTTTTCATTGAGACACCTTTTACTTTCTCTACTGGTGAAGATCTACACCTCAGCTATCAGCTACAGAAGTATAGAAATGCAGGGTCATTTGTTCTACCAGTAGATCCAAATGACAAAGAAACATGGGGTGATAGTGAACATAGATTAGCATATGTATCAGAAACAACAGTAATTTTCAAAGACATAGTTCAAGTACGCGATGATCAATGGTGGAAAGCACTTTCATCAGGTTACATAACTCAATGGGCAGCAATGTACCCTCAAAAAATTGATGCACTCTTCTATGCTCATACAGTTGATGAAGTAAAAGCACTTTCACCACTTCTTGAAAAATTCAGATCAACAGTTGGTAAAAAAGCATACATTGTTGTTTCTGGTGGTAACTTTTGTCCTTGTGAAAAAGCTGCAGAAGCACTTAAATGGCCTTTGGTTGTTTGCAAAGAAAGAAGGTTTAAGATATTTGATTTGAGTGTAGGTTCAATTTCTGGTGTGTCAAACTCTGAAGCACCAGTTATACAAGCTGTGTATACTAGTTTGAAGGGTTTGATCAAAATTCATAATCCAAGTGTTGTTATTACTGTGGATGATATTGATGTTAATGTGAGAAAGGCTTTGAAAATGGCTTCTGAAACTAATTCAAATGGTACTACTTTGGTTCTTTTGCCAAGAGCTTCTGTGTCTAAAGTTCTTTGGATGGCTGATTTGAGATCAACAGCATTGCCAAATTGGAACAAAATGAGGCTATCCATCAACATCATAACTCAAAACAGAGTGAATTCACTATCAAGGCTTCTAAAATCACTGACCAATGCATACTATCTAGGAGATGAAATTCCAATCACATTCAACATGGATAGTAAAGTTGATGAATCAACAATAAAACTAGTAACATCATTTGATTGGCCACATGGACCAAAAACACTAAGAAGAAGAATAATCCAAGGTGGACTAATAAGAGCAGTTAGTGAAAGTTGGTATCCATCATCAGATGATAACTTTGGTTTACTCTTAGAAGATGACATTGAAGTTTCACCTTATTACTATCTATGGATCAAATATGCACTCATGAATTACCATTATGACCCTCAAGTTTCTCTCCCTGAACTCTCTTCAATCTCTCTATACACACCAAGAATAGTTGAAGTTGTTAAAGAAAGACCAAAATGGAATGCAACTGAATTCTTCAAACAAATTCATCCAAACACACCTTATCTTCATCAGTTACCATGTAGTTGGGGAGCAGTGTTTTTCCCTAAACATTGGAGAGAGTTTTATGTCTACATGAACATGAGGTTCACTGAAGATGCTAAGAAAAACCCGGTTCAAATACCGAAATCGAGAACAAATGGTTGGCAAGCTTCATGGAAAAAATTTCTGATTGATATGATGTATCTAAGAGGCTATGTTAGTCTTTATCCAAATTTTCCAAACCAAGCTAGCTTTTCAACTAATCATATGGAACCAGGTGCACATATTAGTGCTAAAGATAATGTGATTAAGCATAATAAAATGGATTTTGAAGTGCCATTATTGAAAGATGATTTTAGAAACTTTTTGCCTGGAATGAAAATGCCTTCAGCTTCAAGATTACCATCTTTGAATCTTTTTAATCAAGCTGTTTCTCTTAAGGGACTTAAATCTGCTGGTGCTAAGTTGGGACAAGATGTTCTTAGATGTGATAATGTTACTGAGATTGTTGCTGTTGATCATCAAACTGGTTTACCACATCACTGCTACAAATTCTGA 2784 0.3506 MIFSRNSTSRSGDSLEGMLNDYVAGKTKPKPLKSGSTKFVAALTCLQFFFAIYATFLLYYMGPSIDLRTKPDFSRIAQQWKQLMITPHIVGHYQEASSSLIQETNPSLVCENEKIDFLQKKSNDVQMIKIKRELYEEVLNFQTKTIGTENLQELMKMKSKWDLNVPNPTKPKINVLLNHFKRKTLCAQLDSLLQQTLPFHQVWVLSFGSPNEASLKRIVESYNDSRISFISSSYDFKYYGRFQMALQTEADLVYIVDDDMIPGRKMLEILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFKSKEAGLYLPDPAYDITIDKIVQVDFLSSSWFLSAELVKTLFIETPFTFSTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSSGYITQWAAMYPQKIDALFYAHTVDEVKALSPLLEKFRSTVGKKAYIVVSGGNFCPCEKAAEALKWPLVVCKERRFKIFDLSVGSISGVSNSEAPVIQAVYTSLKGLIKIHNPSVVITVDDIDVNVRKALKMASETNSNGTTLVLLPRASVSKVLWMADLRSTALPNWNKMRLSINIITQNRVNSLSRLLKSLTNAYYLGDEIPITFNMDSKVDESTIKLVTSFDWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDNFGLLLEDDIEVSPYYYLWIKYALMNYHYDPQVSLPELSSISLYTPRIVEVVKERPKWNATEFFKQIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDAKKNPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQASFSTNHMEPGAHISAKDNVIKHNKMDFEVPLLKDDFRNFLPGMKMPSASRLPSLNLFNQAVSLKGLKSAGAKLGQDVLRCDNVTEIVAVDHQTGLPHHCYKF* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1673 927 PANTHER OSJNBA0004B13.7 PROTEIN 28 927 - -
Tpr4g1673 927 SUPERFAMILY Nucleotide-diphospho-sugar transferases 167 370 IPR029044 -
Tpr4g1673 927 CDD Glyco_tranf_GTA_type 183 274 - -
Tpr4g1673 927 SUPERFAMILY Nucleotide-diphospho-sugar transferases 591 795 IPR029044 -
Tpr4g1673 927 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 594 842 IPR029044 -
Tpr4g1673 927 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 149 379 IPR029044 -
Tpr4g1673 927 PANTHER GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 28 927 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1673 Tpr-Chr4 17278343 17283742 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1673 - - gmx:100790938 1674.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1673 4 17278343 17283742 Tpr4g1673 4 17278343 17283742 ECH