Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1672 ATGGTAGAGTGTGAGGGAAGAAAAGAGATGGAGGAGGTGAAAGAATCAAGATTTAAGAGGATTTGTGTTTTTTGTGGTAGTAGTCCTGGTAACAAGAGTAGCTATAGAGATGCTGCTATTGAGCTTGGAAATGAGTTGGTTTCAAGAAATATTGATTTGGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGTTAGTTTCTCAAGCTGTTTACGATGGAGGTCGTCATGTGATCGGGGTTATTCCAAAGACACTGATGCCAAGAGAGATAACTGGAGAGACAGTAGGAGAAGTGAAGGCAGTAGCCGACATGCATCAAAGAAAAGCTGAGATGGCTAAGCATTCTGATGCTTTTATTGCCTTACCCGGTGGCTATGGGACACTTGAGGAGCTTCTTGAGGTCATTACTTGGGCTCAACTTGGCATCCATGATAAACCAGTGGGGTTATTGAATGTAGATGGCTTCTACAATTCTTTGTTATCTTTCATTGACAAAGCTGTGGAGGAAGGTTTCATTAGCCCTAAAGCTCGTCATATAATTGTATCTGCCCCATCAACAAAAGAACTTTTCAAAAAGATGGAGGAATATTCCCCACAACACGAAAGAGTTGCATCTAAGCTAAGTTGGGAAATTGCATCTCAAGTTGTGACATTGTGA 657 0.417 MVECEGRKEMEEVKESRFKRICVFCGSSPGNKSSYRDAAIELGNELVSRNIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGFYNSLLSFIDKAVEEGFISPKARHIIVSAPSTKELFKKMEEYSPQHERVASKLSWEIASQVVTL* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1672 218 Gene3D - 7 195 - -
Tpr4g1672 218 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 11 212 - -
Tpr4g1672 218 Pfam Possible lysine decarboxylase 63 193 IPR031100 -
Tpr4g1672 218 PANTHER LOG FAMILY PROTEIN YJL055W 11 212 - -
Tpr4g1672 218 SUPERFAMILY MCP/YpsA-like 18 196 - -
Tpr4g1672 218 TIGRFAM TIGR00730: TIGR00730 family protein 19 196 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1672 Tpr-Chr4 17263988 17271059 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1672 K22522 - gmx:100815735 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1672 4 17263988 17271059 Tpr4g1672 4 17263988 17271059 ECH
Tpr7g4396 7 52725890 52730853 Tpr4g1672 4 17263988 17271059 PCT