Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1646 ATGGGATTCTCCAAAATCTCTCTATCTCTTTTTTTCTTCATTTTATTTTCTTCCTCATATGCAACTTCTCGTACCATACTTCATCAAAAATTTCAATCAACAACAAAAGTTTCACCAAACAACCGAGCTGAAAAGCTTATAAGAAGCTTCAACTTATTCCCAAAGGAGCCAGTTAACATAATTCATAGTAACCACTCTCTCAATTTTGTCCCCGGAAAGATTGTCGAGAATAAGTTCTCGTTTTTTGGTGATTCCGATGAACCTTCCGTCGCAAATCTTGGTCACCATGCCGGATACTATTCGCTTCCTCGTTCCAACTCAGCAAGGATGTTCTATTTTTTCTTTGAATCAAGAAACAAAAATAAAGATGCACCAGTTGTGATATGGTTGACTGGAGGTCCAGGTTGTAGTAGTGAAATTGCTTTGTTTTTTGAGAATGGTCCTTTTACAATTGCTGATGACTTGTCTCTTAAATGGAATGACTATGGTTGGGATAAGGCATCAAATATTATTTTTGTTGACCAACCCATTGGGACAGGTTTCAGCTCAAGTTCTGATGATAGTGATATTCCTCATGATGAAACTGGTGTTAGCAATGATTTGTATGATTTCTTGCAGGCGTTTTTCAAGCAACACTCTGAGTATGTTAAGAATGATTTTTATATTACTGGAGAATCATATGCTGGACATTATGTTCCAGCTCTTGCATCTCGTGTTCACCAAGGAAACAAGGACAACAAAGGAATTAAAATTAACCTCAAGGGTTTTGCTATTGGTAATGGATTGACCAACCCAGCAGTTCAATATCCAGCCTACACTAAGTTTGCAGTTGAAAACAAATTGATTACAAAGGAAGATGAAGCTGATATCAACAAGTCCGTCCCTGATTGTGTGGCTGCCGCAAAAACTTGCGAAAGTCAAGGTGGAGATAGTTGCTTAACAGCCTTAAATCAATGTGAAGAGATTATGAATAGTGTATTGTCCATTGCTGGAAACATCAATTACTATGACATCAGAAAGCAATGTGTGGGACCATTGTGTTATGACTTCTCAAATGTGGAGAAACTTCTAAATAAGAAGTCAGTTAAGGATGCTTTAGGTGTTGGGGACATAGAATTTGTTTCATGTAGCAAAGTTGTGTATAATAATATGTTGCAAGATTGGATGAATAACTTTGAAGTGGGTATTCCTTCACTTCTTGAAGATGGAATTGATGTTCTTATATATGCAGGGGAATTTGATTTTATTTGCAATTGGATTGGAAATTGGGATTGGGTTCATGCAATGCAGTGGTCAGGTCAAAAACAGTTTGCGGCGTCTAAATCAGTTCAATTTTCGGTTGATGGTACAAAAGCTGGATTGTTGAATAGTTATGGACCTCTCTCTTTTCTAAAGGTGTTTGGGGCAGGACATATGGTCCCAAAGGATCAACCAAAAGCTGCACTTCAGATGTTGGTAAACTGGACACAAGGGAAACTTAATGGGACAAGCATTTAA 1497 0.3761 MGFSKISLSLFFFILFSSSYATSRTILHQKFQSTTKVSPNNRAEKLIRSFNLFPKEPVNIIHSNHSLNFVPGKIVENKFSFFGDSDEPSVANLGHHAGYYSLPRSNSARMFYFFFESRNKNKDAPVVIWLTGGPGCSSEIALFFENGPFTIADDLSLKWNDYGWDKASNIIFVDQPIGTGFSSSSDDSDIPHDETGVSNDLYDFLQAFFKQHSEYVKNDFYITGESYAGHYVPALASRVHQGNKDNKGIKINLKGFAIGNGLTNPAVQYPAYTKFAVENKLITKEDEADINKSVPDCVAAAKTCESQGGDSCLTALNQCEEIMNSVLSIAGNINYYDIRKQCVGPLCYDFSNVEKLLNKKSVKDALGVGDIEFVSCSKVVYNNMLQDWMNNFEVGIPSLLEDGIDVLIYAGEFDFICNWIGNWDWVHAMQWSGQKQFAASKSVQFSVDGTKAGLLNSYGPLSFLKVFGAGHMVPKDQPKAALQMLVNWTQGKLNGTSI* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1646 498 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 35 492 - -
Tpr4g1646 498 ProSitePatterns Serine carboxypeptidases, serine active site. 222 229 IPR018202 GO:0004185
Tpr4g1646 498 Gene3D alpha/beta hydrolase 79 496 IPR029058 -
Tpr4g1646 498 ProSitePatterns Serine carboxypeptidases, histidine active site. 461 478 IPR033124 GO:0004185
Tpr4g1646 498 Pfam Serine carboxypeptidase 91 490 IPR001563 GO:0004185|GO:0006508
Tpr4g1646 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 492 IPR001563 GO:0004185|GO:0006508
Tpr4g1646 498 SUPERFAMILY alpha/beta-Hydrolases 92 492 IPR029058 -
Tpr4g1646 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 172 IPR001563 GO:0004185|GO:0006508
Tpr4g1646 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 183 IPR001563 GO:0004185|GO:0006508
Tpr4g1646 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Tpr4g1646 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 461 474 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1646 Tpr-Chr4 16871874 16876131 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1646 K16298 - gmx:100798795 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1646 4 16871874 16876131 Tpr4g1646 4 16871874 16876131 ECH