Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1645 ATGGAGAAGCTGATGAACATTCTGAAACCGAAGCCAAATCCGCAGCAAATATTGAGAGATTGGCAACGTAAGGTTCTTCAAGAGTCTCGAAACATTGATCGCCAAATTCTCGATATTCAGAGAGAAGAAACAAAAGTTCAGAAGGCTATTAAAGAAGCTGCAAAGAGGAATGATATTGGCTCTGCAAAGGCACTCGCTACTGAACTTGTGAGATCCAGGAAAACAGTGAGCCGTCTTCATGAAAATAAGGCGCAATTGAATTCAATAACAATCCACCTTAAAGAAAGTGTTGCAATTTCTCGTATTGTAGGACATCTATCAAAGAGTGCCGAGGTTATGAAGCTTGTTAATAACCTCATGAAGACTCCTCAAATGGCTGTGGCTATGCAAGAGTTCAGCAAAGAAATGATAAAGGCAGGAGTTATTGAGGAGATAGTAAACGACGCCGTCGACTCGGCATTAGATTCCGAGGACATAGAAGATGAGATAGAAGAAGAAGTTGATAAAGTCTTAACTGCAATAGCTGGTGAGACAGCCGCACAACTTCCTGAAGCTGTGAGGAAACAAAAGGTGAAGCAACCTGCTCAAAGTGTTGGAGCCGCGGATGAGGAACAGGCTATAGCTGAGGGTGTCGATGATGAGGAGGAAATGGAAGAAATAAGGGTCAGACTTGCTAAAGTCAGGTCCTAA 690 0.4275 MEKLMNILKPKPNPQQILRDWQRKVLQESRNIDRQILDIQREETKVQKAIKEAAKRNDIGSAKALATELVRSRKTVSRLHENKAQLNSITIHLKESVAISRIVGHLSKSAEVMKLVNNLMKTPQMAVAMQEFSKEMIKAGVIEEIVNDAVDSALDSEDIEDEIEEEVDKVLTAIAGETAAQLPEAVRKQKVKQPAQSVGAADEEQAIAEGVDDEEEMEEIRVRLAKVRS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1645 229 Pfam Snf7 21 187 IPR005024 GO:0007034
Tpr4g1645 229 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 229 IPR005024 GO:0007034
Tpr4g1645 229 MobiDBLite consensus disorder prediction 193 214 - -
Tpr4g1645 229 Coils Coil 32 52 - -
Tpr4g1645 229 Gene3D - 9 185 - -
Tpr4g1645 229 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 1-LIKE ISOFORM X1 4 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1645 Tpr-Chr4 16846869 16851134 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1645 K12193 - gmx:100781929 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1645 4 16846869 16851134 Tpr4g1645 4 16846869 16851134 ECH