Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1638 ATGCAGACGGAAAAACCAAAAATGGCGAAGAAATCAATCGGAAACATAATGCGAAAAAGGCTTTCGGATATCACAAATTCTTCTCAATCTCAGCAAGATAATAACAACCAACCACTCTCGCTTGATAACAATTCCATTCAACAACTCCTAAAGGAAAGAGCGAATTTAATCAACCTCCTTGCAGAAAGAAATAAAATGTTAGAAAGGAGTGGAGCTGAATTGCAGAGAATGCGAGCTGATATGAAGAAGTTGCAAATGCAAAATTGGAATCTTGCTCAGTCCAATAGTCTCATGTTAGCGGAGCTTAACTTAGGGAGGGATAAGATAAAAACACTGCAGCATGAAATATTGTGGAGGGCTGCTTTGATTAATGGAAAGACCTTCAACATGCAGGAAAAAGTGGAGATTGACTCTGAAAAAAATGCATCATTATCACAGTTAAAGGAAGAAGATGAAAAAGAAGCGCATCCATCGCCTATAACTAGCAATGATGAAAAACAATGTTGTTTGAACAGGAGACGCATAAGGAGTAGATCTACTGGTTCTTCTACTGCTTCCACATCCACAAAGAATACAGGCAAAGAAAAAGTTAAAGACAATAGGAGAAGAAGAAGTTTGAGGAGACATTCTGCTACGTCAAAGGTCCATCAACACGAACCTCTAGAAAATTTGTTTGAGATAGAAGACGCTCAATACGCTATCACTCAATCGGATAAACCAATTTCTTCATCTGCAAAAACTGAAAGAAGAGAAAACTCTTGTTTAAGAAATGAAGCACCAAGGCATTCTTTTGGAAGACCCTTGAGAAGGGCAGCTGAGAAGATTCCATCTTACAAGGAAATCCCTTTAAATGTCAAGATGAGAAGGCTAGCATAA 876 0.3824 MQTEKPKMAKKSIGNIMRKRLSDITNSSQSQQDNNNQPLSLDNNSIQQLLKERANLINLLAERNKMLERSGAELQRMRADMKKLQMQNWNLAQSNSLMLAELNLGRDKIKTLQHEILWRAALINGKTFNMQEKVEIDSEKNASLSQLKEEDEKEAHPSPITSNDEKQCCLNRRRIRSRSTGSSTASTSTKNTGKEKVKDNRRRRSLRRHSATSKVHQHEPLENLFEIEDAQYAITQSDKPISSSAKTERRENSCLRNEAPRHSFGRPLRRAAEKIPSYKEIPLNVKMRRLA* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1638 291 Coils Coil 67 87 - -
Tpr4g1638 291 PANTHER SHUGOSHIN 2 4 290 IPR044693 GO:0000775|GO:0034090|GO:0045144
Tpr4g1638 291 MobiDBLite consensus disorder prediction 174 191 - -
Tpr4g1638 291 PANTHER SHUGOSHIN 4 290 - -
Tpr4g1638 291 Pfam Shugoshin C terminus 265 289 IPR011515 GO:0000775|GO:0005634|GO:0045132
Tpr4g1638 291 MobiDBLite consensus disorder prediction 139 221 - -
Tpr4g1638 291 MobiDBLite consensus disorder prediction 237 262 - -
Tpr4g1638 291 MobiDBLite consensus disorder prediction 139 160 - -
Tpr4g1638 291 MobiDBLite consensus disorder prediction 243 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1638 Tpr-Chr4 16726239 16729899 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1638 - - mtr:MTR_4g057530 412.92