Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1630 ATGCAGCTATCAATGGCTTCCCAGATTCTCGCATCACCTTCACCACTCACTTCTCACTCTCTTCTCCGAACATCTTTCTCCGGCGTCTCTCTCAAGCTTTCTCCTCAATTCTCAACTCTTTCATCTTCCAATTTCAAGCCTCTTACTGTCGTTGCTGCTGCCAAGAAAGCCGTCGCTGTTCTTAAGGGTACTTCCACCGTTGAAGGTGTCGTCACTCTCACTCAAGAAAACGAAGGTCCAACAACAGTTAATGTTCGAATCACCGGCCTTACTCCAGGGCTTCATGGTTTTCACCTACATGAGTATGGTGATACCACAAATGGGTGTATCTCAACAGGACCACATTTTAATCCTAATCAGTTGACACATGGTGCTCCTGAAGATGAAATCCGTCATGCGGGTGACCTGGGAAACATAGTTGCTGATGCCAATGGAGTTGCAGAGGCAACAATCGTTGACAATCAGATACCACTCACTGGCCCCAATTCAGTTGTTGGGAGAGCCTTAGTGGTCCACGAGCTTGAAGATGACCTCGGAAAGGGTGGACATGAACTTAGTTTGAGCACTGGAAATGCTGGTGGAAGATTAGCTTGTGGTGTTGTTGGCTTGACTCCAGTATAA 621 0.4702 MQLSMASQILASPSPLTSHSLLRTSFSGVSLKLSPQFSTLSSSNFKPLTVVAAAKKAVAVLKGTSTVEGVVTLTQENEGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNQLTHGAPEDEIRHAGDLGNIVADANGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLTPV* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1630 206 ProSitePatterns Copper/Zinc superoxide dismutase signature 2. 190 201 IPR018152 -
Tpr4g1630 206 PRINTS Cu-Zn-superoxide dismutase family signature 96 118 IPR001424 GO:0006801|GO:0046872
Tpr4g1630 206 PRINTS Cu-Zn-superoxide dismutase family signature 132 141 IPR001424 GO:0006801|GO:0046872
Tpr4g1630 206 PRINTS Cu-Zn-superoxide dismutase family signature 151 173 IPR001424 GO:0006801|GO:0046872
Tpr4g1630 206 PRINTS Cu-Zn-superoxide dismutase family signature 176 202 IPR001424 GO:0006801|GO:0046872
Tpr4g1630 206 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 38 204 IPR024134 -
Tpr4g1630 206 Gene3D Superoxide dismutase, copper/zinc binding domain 51 205 IPR036423 GO:0006801|GO:0046872
Tpr4g1630 206 Pfam Copper/zinc superoxide dismutase (SODC) 67 201 IPR001424 GO:0006801|GO:0046872
Tpr4g1630 206 CDD Cu-Zn_Superoxide_Dismutase 63 198 IPR001424 GO:0006801|GO:0046872
Tpr4g1630 206 SUPERFAMILY Cu,Zn superoxide dismutase-like 56 203 IPR036423 GO:0006801|GO:0046872
Tpr4g1630 206 PANTHER SUPEROXIDE DISMUTASE [CU-ZN] 1 38 204 - -
Tpr4g1630 206 ProSitePatterns Copper/Zinc superoxide dismutase signature 1. 96 106 IPR018152 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1630 Tpr-Chr4 16649180 16653132 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1630 K04565 - gmx:100815376 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1630 4 16649180 16653132 Tpr4g1630 4 16649180 16653132 ECH