Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1627 ATGGCATCATCAACATTATCTTCTCTCTCTTCACTACCATTGCAACACACTTTCACCTCTAACTTCAAAACTTCTTCTCAATTTCCCAACAAAACTTCACCTTTTATCATTTTCGCTCAACAGAAAATAAAGAAAACTCGAAAGATAATTTTGAAGGAAGATATTGTTAATATTGGAAAGAAAGGGGACCTTCTTAATGTAAGGGCTGGTTTTTTCAGAAATTTTCTGTTTCCAAGTGGCAAAGCTGAGATTGTAACTCCTGCTATACTCAAGGAAATGAAGATAGAGGAAGAAAGAATTGAGGCTGAGAAACTACGGGTAAAAGAAGAGGCGCAGCAACTTGCTCTACTTTTTGAAACCACGGGAGGTTTCAAGGTTAAGCGTAAAGGTGGTAAAGGAAAACAAATCTTTGGAAGTGTTACGGCTCAAGATCTTGTTGACATAATCAAGTCACAGCTTCAAAGGGAGGTGGACAAGAGAATTGTTACTCTTCCCGAGATCCGTGAAACGGGAGAATATATTGCAGAGTTAAAACTTCACCCAGAAGTTACAGCGAAAGTGAGGGTCTTTGTTTCAGCTAACTAA 585 0.3846 MASSTLSSLSSLPLQHTFTSNFKTSSQFPNKTSPFIIFAQQKIKKTRKIILKEDIVNIGKKGDLLNVRAGFFRNFLFPSGKAEIVTPAILKEMKIEEERIEAEKLRVKEEAQQLALLFETTGGFKVKRKGGKGKQIFGSVTAQDLVDIIKSQLQREVDKRIVTLPEIRETGEYIAELKLHPEVTAKVRVFVSAN* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1627 194 Coils Coil 90 113 - -
Tpr4g1627 194 PANTHER 50S RIBOSOMAL PROTEIN L9, CHLOROPLASTIC 3 194 - -
Tpr4g1627 194 Gene3D - 107 194 IPR036791 -
Tpr4g1627 194 Gene3D - 48 106 IPR036935 -
Tpr4g1627 194 ProSitePatterns Ribosomal protein L9 signature. 59 86 IPR020070 -
Tpr4g1627 194 Hamap 50S ribosomal protein L9 [rplI]. 47 194 IPR020594 GO:0003735|GO:0005840|GO:0006412
Tpr4g1627 194 TIGRFAM L9: ribosomal protein bL9 48 193 IPR020594 GO:0003735|GO:0005840|GO:0006412
Tpr4g1627 194 Pfam Ribosomal protein L9, C-terminal domain 109 192 IPR020069 -
Tpr4g1627 194 PANTHER 50S RIBOSOMAL PROTEIN L9 3 194 IPR000244 GO:0003735|GO:0005840|GO:0006412
Tpr4g1627 194 SUPERFAMILY Ribosomal protein L9 C-domain 103 193 IPR036791 -
Tpr4g1627 194 Pfam Ribosomal protein L9, N-terminal domain 48 93 IPR020070 -
Tpr4g1627 194 SUPERFAMILY L9 N-domain-like 48 103 IPR009027 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1627 K02939 - gmx:100500390 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1627 4 16627735 16631215 Tpr4g1627 4 16627735 16631215 ECH