Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1620 ATGGAAAAACTCTCTCATTTTTCCATCATTCTTCTCTTCCTTGCTTCCTTTTTTCTTCTACAAAACGTAACAGCTTTGAAAAATCAAGATGGATCAGAAGAATGGGGCTATGTTCAAGTTAGACCCAAAGCACACATGTTTTGGTGGCTATATAGAAGTCCATACAGAGTGGAAGATTCTTCAAAGCCATGGCCAATAGTTCTTTGGTTGCAGGGTGGCCCTGGTGCTTCAGGTGTTGGAATTGGAAACTTTGAAGAGGTTGGACCTTTGGATACAAGCTTGAAGCCAAGGAATTCAACATGGTTGTTAAAAGCAGATCTCTTGTTTGTGGACAATCCGGTTGGAACAGGATACAGTTTTGTGGAGGATCGAAAACTTTTTGTTAAAACAGATGATGAAGCAGCCACTGATTTGACCACATTGTTAATTAAGCTATTTAATAATGATGAGAAACTTCAAAAGAGTCCTCTGTACATTGTAGCAGAGTCTTATGGTGGCAAATTTGCTGTCACTCTTGGATTACATGCTCTTAAAGCTATTGAGGACAAGAAACTCAAGCTCACACTTGGAGGTGTGGCTTTAGGAGACAGTTGGATCTCACCAGAAGATTTTGTGTTCTCATGGGGTCCTCTCCTCAAAGACCTCTCAAGACTTGATGATAATGGTCTGGAAAAATCAAATAGTATAGCTGAGAGGATCAAGAAGCAACTTGAAGATGGTAAATTTGTTGAGGCAACCAACTCATGGGGTGAGCTTGAAAATGTGATTTCTGCTAGCAGTAACAATGTGGATTTTTACAATCTGTTGGTGGATGCGGGAAGTGATTCAGTAACCATAGCAGCATCGGAACTGGGATTACTCCAAGAAATATCAATGAAGCGGTACTCCAAGTATCTTACATTCAGAAGGACAAGGTTTTCTACTCCTGGTGGTGACGATGATATTGATACTTTATTAAATGGTGTTATAAAGAAGAAGTTAAAGATCATCCCCGAGAATGTCACATGGGGAGGTCAGTCCAATGATGTTTTCGATTATCTTCAAGGTGATTTTATGAAGCCAAGAATTGATGAGGTTGATCAGCTACTGGCAAAGGGAGTCAATGTTACTGTGTACAATGGACAAGTTGATCTGATTTGTGCTACCAAGGGGACTGAAGCATGGCTTAGGAAACTCAAATGGGAAGGGCTTAGAAGTTTCTTGGGGAAAGACAGAACAGTCCTCTACTGTGGAAATAACAAAACGACCAAAGGCTTTTACAGATCATACAAAAACCTACAATTCTATTGGATTCTTGGAGCTGGTCATTTTGTACCCACTGATCAACCTTGTGTGGCATTAGAAATGATAGCTTCAATTACACAATCACCAGCTACTTGA 1380 0.4014 MEKLSHFSIILLFLASFFLLQNVTALKNQDGSEEWGYVQVRPKAHMFWWLYRSPYRVEDSSKPWPIVLWLQGGPGASGVGIGNFEEVGPLDTSLKPRNSTWLLKADLLFVDNPVGTGYSFVEDRKLFVKTDDEAATDLTTLLIKLFNNDEKLQKSPLYIVAESYGGKFAVTLGLHALKAIEDKKLKLTLGGVALGDSWISPEDFVFSWGPLLKDLSRLDDNGLEKSNSIAERIKKQLEDGKFVEATNSWGELENVISASSNNVDFYNLLVDAGSDSVTIAASELGLLQEISMKRYSKYLTFRRTRFSTPGGDDDIDTLLNGVIKKKLKIIPENVTWGGQSNDVFDYLQGDFMKPRIDEVDQLLAKGVNVTVYNGQVDLICATKGTEAWLRKLKWEGLRSFLGKDRTVLYCGNNKTTKGFYRSYKNLQFYWILGAGHFVPTDQPCVALEMIASITQSPAT* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1620 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 457 IPR001563 GO:0004185|GO:0006508
Tpr4g1620 459 Pfam Serine carboxypeptidase 30 454 IPR001563 GO:0004185|GO:0006508
Tpr4g1620 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 120 IPR001563 GO:0004185|GO:0006508
Tpr4g1620 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 170 IPR001563 GO:0004185|GO:0006508
Tpr4g1620 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
Tpr4g1620 459 ProSitePatterns Serine carboxypeptidases, serine active site. 159 166 IPR018202 GO:0004185
Tpr4g1620 459 Gene3D alpha/beta hydrolase 17 458 IPR029058 -
Tpr4g1620 459 PANTHER CARBOXYPEPTIDASE 7 457 - -
Tpr4g1620 459 SUPERFAMILY alpha/beta-Hydrolases 20 456 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1620 Tpr-Chr4 16405412 16411922 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1620 K09646 - gmx:100787940 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1620 4 16405412 16411922 Tpr4g1620 4 16405412 16411922 ECH