LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr4g1619	ATGCAGCCGAATTTGTTCCCCTTTGGAACCGCGTTGAGTAATCCATTTATTTTCAATGGTGATTTGAGTGAAGGAGGTGGAATCGATAGTTCTAGGGTTTTCGTTTTGCTTCCTTTCTTCTTGCTCTCTCAAGGAGGAGCAATGGATTTGTCGAAAGTCGGTGAGAAGATCTTGAGTTCTGTTAAGTCCGCTAGATCGATTGGATTGCTTCCTCCTGTTTCTGATCGGCCTGAGGTTCCAGCTCGGGCTGCTGCTGCAGCTGCTGTAGCTCGTGCTCTTGCAGGGTTACCTCCTCATCAGAGGTATAGTTTTTCATCAAGTTCAGAAGAGCTGAGTTCAATATATGGAAGCAGACCTCATGGCCCTATAGTGGACGAACTGGAGGATGAATTCTACGAGGAGGATTTTGATCCGATTAGGCATGTTTTAGAGCACGTTTCATCTGAAGAAAATGAGCTATTATATTTTGAAAAGCAGGCTTCCCTTAGATTAACACAACTGGATAAAGTAGCAGAGCGTTTGTCTCGCCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTCAGGGAATTGGAGAAAGACTTAAGAATTGCAAATGTCATCTGTATGAATGGTAGAAGACACCTGACATCTTCTATGAATGAGGTTTCAAGGGATTTGATTGTGAATTCTTATTCAAAAAAGAAACATGCTCTAATGGAAATGCTTCCAGTCTTGAATGAACTTCGACGTGCATCAGAGATGCAATCAACACTTGAATCTCTTGTAGAGGAAGGGAATTATTGGAAGGCATTTCAAGTCCTATCGGAGTATTTGCAACTATTAGATAGTTTGTCAGAGCTTTCTGCAATGCAAGAGATGAGCCGTGGTGTGGAGGTTTGGCTGGGAAGAACTTTGCAGAAGTTGGATGCTCTTCTATTGGATGTATGTCAGGAATTTAAGGAAGATGACTATATGACAGTAATTGATGCGTATGCATTGATAGGGGATACCACTGGTCTTGCTGAAAAGATACAAAGTTTCTTCATGCAAGAAGTCATATCAGAGACGCACTCGGTGCTAAAGGCTATTGTGCATGAGGATGACGAGGGACTTGCACAAAATAGTAGGCTCACTTACAGCGATCTATGCCTTCAGATACCTGATTCTAAGTTTAGGCAGTGCTTACTAAGAACATTGGCTGTGCTATTTGACCTCATATGTTCATACCATGAAATTATGGATTTTCAGCTAGAGAGTAAGGACTCAGCAGCACAAACTTCTGATAAGGGCAATGAAGACATTTCTTGTAGTTCAGGTGAGGCTCGGGAAGTTGATTCAGATGTAAGAGTTTGCAACAATTCCATGTCCAGTTCTGGGGATGTGATACACGGCTCATCTTCTAGAAAGGAATCTTCAGCAATCAGCTCACTGACTGAAATTGCTGGTTCACCATACAGTGATTCTCATGATCCAGTGAATGAGGCTAGAAAGGAGGAAAGTTCAGCGTCAAGCATCGATTCCCCATGGTACCATCTTCGGAAAGAAGCTACAACATTTGTTTCTCAGACCCTTCAAAGAGGGCGCAAGAATCTGTGGCATCTCACTGCAAGCCGTGTCTCAGTGTTGCTTTCTTCTGCTGCAGCTTGTTCTGCTAGCATTCATCAATTCTTGAAAAACTATGAAGATCTGAGGGTATTCATTTTGACTGGGGAAGCCTTCTGTGGTATGGAAGTGGCTGAGTTCAGGCAGAAGTTGAAGGTTGTTTGTGAAAACTATTACATAGCTTTTCATCGACAAAATGTGCATGCACTAAAAATGGTGTTGGAGAAGGAGACTTGGTTAAAATTACCTCCAGAGACTGTTCAAATTATCAGTTTTGCTGGACTTATTGGTGATGGAGCACCATTGATTTCTTTATCTAACAGTAAATCAATGAATGTCAATGCGATTCATTCCAATAATAAATCAGTGAACATGGTTCAGACTGGTGCGAGGAAGAGTGGGTTCTCTCATTGGATTAAAAACGGAAATCCTTTTCTGCAAAAACTATCAACCTCCAAAGATGGTCATGGTAATTCCCAACATAATGGGTCAAGTTATGGTGAATTTGATGGAGGCTCAGCCAACAACTATCATGATGATAGAGACACCCCTAGAAAGAATAACTCCAGTCAATCGAATGGTGCCAATTCTATTTCAGAAGAGGAAAATGAGGATCTTCTTGCTGACTTTATTGATGAAGACAGTCAACTTCCAAGTCGAAGTACTAAATCCCATCATTCAAGATCTCACTCTTCACATGGTAATGATGAAGAGAGTACAACCCAAACTGGTTCTTCTCTATGTCTCTTAAGGTCTATGGACAAGTATGCAAGGCTTATGCAGAAATTAGAAGTAGTAAATGTTGAGTTCTTTAAGGGAATATGCCAGTTGTTTGAAATTTTTTTCTATTTTATATATGAAACATTTGGTCAGCAGAATACTAATTCAAGTGGAAAAAGCTCAGCTAACTCTCTTAATTATCGCTTGAGGACAGCCTTATCTAGAATAAACCAAGAAAGCGAAGAGTGGCTTAAGCCTCACTCAGCTTCACCAACATCTTTAAGTTCATCATTTGTACATGGAGAGGTGACACCTACAAATCCTCCAAATATGAATGCTGGTCACCCCTCGTCAACAGCTTTTAGTCTTAAGGAAAGGTGCGTGGCTGTTGACACTATATCTCTTGTCGCTCGAATTCTGAATAGAGCCAAAGCTCATCTCCAATCAATGCTCTTGCAAAGTAATTCAACTGTACTTGAGGATTTCTATGTTCATCTGGTGGATGCTGTACCAGATCTTATAGAGCACGTGCATCATACAACAGTAAGACTACTGCTGCACATTAATGGGTATGTTGAACGCGTTGCCAATTGTAAATGGGAAGTAAAAGAACTTGGGATGGAGCATAATGGGTATGTTGATTTGCTGCTGGGGGAGTTTAAGCACTTTAAAACACGACTCGCTCATGGAGGAATTCGTAAAGAGACTCAAGACATATTGTTGGACTACGGGCTTGACATTATTGCGGAAACTCTTGTGGAAGGACTTTCACGGGTGAAGAGATGTAATGATGAAGGACGAGCGCTAATGTCATTGGATCTGCAGGTTTTGATAAATGGGCTAAAGCATTTTGCGTCGTTGAATGTGAAGTCCAAGCTACAAATGGTCGAAGCTTTCATTAAGGCTTACTACCTTCCGGAGACAGAATATGTGCACTGGGCACGTGCGCACCCGGAATACACTAAAAGCCAGGTTGTTGGATTGGTCAATCTTGTTGCCTCTATGAAAAGTTGGAAGAGGAAAACCAGGTTGGAAATACTGGAAAAGATCGAGTAA	3372	0.4143	MQPNLFPFGTALSNPFIFNGDLSEGGGIDSSRVFVLLPFFLLSQGGAMDLSKVGEKILSSVKSARSIGLLPPVSDRPEVPARAAAAAAVARALAGLPPHQRYSFSSSSEELSSIYGSRPHGPIVDELEDEFYEEDFDPIRHVLEHVSSEENELLYFEKQASLRLTQLDKVAERLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKHALMEMLPVLNELRRASEMQSTLESLVEEGNYWKAFQVLSEYLQLLDSLSELSAMQEMSRGVEVWLGRTLQKLDALLLDVCQEFKEDDYMTVIDAYALIGDTTGLAEKIQSFFMQEVISETHSVLKAIVHEDDEGLAQNSRLTYSDLCLQIPDSKFRQCLLRTLAVLFDLICSYHEIMDFQLESKDSAAQTSDKGNEDISCSSGEAREVDSDVRVCNNSMSSSGDVIHGSSSRKESSAISSLTEIAGSPYSDSHDPVNEARKEESSASSIDSPWYHLRKEATTFVSQTLQRGRKNLWHLTASRVSVLLSSAAACSASIHQFLKNYEDLRVFILTGEAFCGMEVAEFRQKLKVVCENYYIAFHRQNVHALKMVLEKETWLKLPPETVQIISFAGLIGDGAPLISLSNSKSMNVNAIHSNNKSVNMVQTGARKSGFSHWIKNGNPFLQKLSTSKDGHGNSQHNGSSYGEFDGGSANNYHDDRDTPRKNNSSQSNGANSISEEENEDLLADFIDEDSQLPSRSTKSHHSRSHSSHGNDEESTTQTGSSLCLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFYFIYETFGQQNTNSSGKSSANSLNYRLRTALSRINQESEEWLKPHSASPTSLSSSFVHGEVTPTNPPNMNAGHPSSTAFSLKERCVAVDTISLVARILNRAKAHLQSMLLQSNSTVLEDFYVHLVDAVPDLIEHVHHTTVRLLLHINGYVERVANCKWEVKELGMEHNGYVDLLLGEFKHFKTRLAHGGIRKETQDILLDYGLDIIAETLVEGLSRVKRCNDEGRALMSLDLQVLINGLKHFASLNVKSKLQMVEAFIKAYYLPETEYVHWARAHPEYTKSQVVGLVNLVASMKSWKRKTRLEILEKIE*	1124

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr4g1619	1123	MobiDBLite	consensus disorder prediction	479	498	-	-
	Tpr4g1619	1123	PANTHER	UNCHARACTERIZED	2	1123	IPR040047	GO:0032456\|GO:0042147\|GO:1990745
	Tpr4g1619	1123	MobiDBLite	consensus disorder prediction	678	703	-	-
	Tpr4g1619	1123	MobiDBLite	consensus disorder prediction	678	733	-	-
	Tpr4g1619	1123	Pfam	Protein of unknown function C-terminus (DUF2451)	893	1123	IPR019514	-
	Tpr4g1619	1123	MobiDBLite	consensus disorder prediction	748	776	-	-
	Tpr4g1619	1123	PANTHER	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED	2	1123	-	-
	Tpr4g1619	1123	Pfam	Vacuolar-sorting protein 54, of GARP complex	124	413	IPR019515	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr4g1619	K23288		-	gmx:100788476	1852.41

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr4g1619	4	16385306	16403407	Tpr4g1619	4	16385306	16403407	ECH