Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1605 ATGGAAAGAAAGAGGCAAAGTAGAGTGAAGGAGTGGAAAAATTGTATTAATTATTGGTTTTGGTTAGTTGGTTATGTATGTACAATTTGGTGGCTTTTTTCATTTTTGTATCAATTTTTGCCAGCTACATTGATTGGATTTGAAGCTGTAGAATCACCTGGATTGAAGTTGAATAGTGAAGGGGTGAAAGCACTTCATCCTGTTGTTCTTGTGCCTGGTATTGTTACTGCTGGATTGGAACTTTGGGAAGGGAGACCTTGTGCTGATGGACTGTTTAGAAAACGTTTGTGGGGTGCCACTTTTCCTCAAATGCTTAAAAGGCCTTTATGTTGGTTAGAGCATCTCTCTCTACATAATGAGACTGGTCTGGACCCACCAGGAATTCGAGTCAGGGCAGTTGCAGCTGACGATTTTGCTTCTGGTTATCAAGTTTGGGCGGTCTTAATAGAGAATTTGGCAAGAATTGGTTATGAAGGGAAGAATTTGCACATGGCTACCTACGACTGGAGATTGTCTTTCCAAAACACCGAGATTCGAGACCAAAGTCTTAGTAGATTGAAAAGTAAAATTGAGCTTATGTTTGTAACAAATGGCTATAAGAAAGTGGTAGTTGTGCCTCAATCTATGGGGGCTATTTATTTTCTCCATTTCCTAAAATGGGTTGAGACACCTCCTCCCATGGGAGGTGGTGGTGGTCCAGGTTGGTGTGACAAGCATATCAAAGCAATCATGAATATCAGCCCGGAATTTCTCGGTGTTCCGAAGGCAGTTAGCAATATATTTTCAGCTGAAGGCAGTGATGCTGCATTTGTCAGAGCCGTGACTTCTGGCGTTTTAAATTTCGATTACCTCGGACTTCAAACAGTTGAGCATGTCTTGCGGGTTTGTAGAACTTGGGATTCAATCATCTCATTGATGCCAAAGGGAGGTGAAACCATCTGGCGTGACTTGCATTGGGGTCCTAAAGAAGGGAATAAATATGAAAAGAGGGGACATGTGAAGTACTTTGTAAGTAACAACACTTATAGCTGCGCTGATATGCAAAACAGTCTCAACGTAAAAGAACCTATAAATTATGGAGGAATAAACTCTGTTAGCAAGGCCGTCTCACAGTTACTTGCTTCACTTCTTTCTACACTTGATTCAGAATCCGAGGATATTTTATCCAACCGTATTTCCACTACTTTTAACTTAACATGTGAGAATGAGATGCGTAGAGAATGCATCCCAAATGTTGGTAAAAGAAAGGCAACAGGAAGAACCGATCTTGATTTACATAATTTTGTGGCTCCGAAAATGATGAAACGTGCCGATGCTCATTTCTCTCACGGTATAGCAGATAACTTAGATGATCCTAAATACACACATTACAAATACTGGTCTAATCCACTTGAAACCAAACTTCCTGATGCTCCGAATATGGAAGTATACTGCCTATATGGTGTCGAAATTTCGACTGAAAGATCATACGTACCCAAGCTGTCCCTTTCTGACAAGTACAAGCATATTCCTTTCCAGATTAATAATTCATCTGATGTACAAAACGGAACTAAATTACAAAATGATGTTTATTTAGTAGATGGTGATGAGCGTGTGAATGTTGTAAGTTCAGGGTTCATGTGTGCCAAAGGATGGCGCAGAAGAACTCGGTTTAATCCTTCGAGCATGGCTACATATATAAGAGAGTATCAGCAGAAACAACGAGGTAGTGTTCTTGAAGTGAGAGGTCTAGAGAGCGGAGCACGTGTCAACAACATTATGGGAAACGTTGCATTGATTGAAGATATTTTACGAGTTGCTGCTGGAGCAACCGGTGCAAATATTGGAGGTGATAGGATATTTTCAGATATCGTGAGGATATCTGAGAGGATTAGTCTCAGACTATGA 1887 0.4054 MERKRQSRVKEWKNCINYWFWLVGYVCTIWWLFSFLYQFLPATLIGFEAVESPGLKLNSEGVKALHPVVLVPGIVTAGLELWEGRPCADGLFRKRLWGATFPQMLKRPLCWLEHLSLHNETGLDPPGIRVRAVAADDFASGYQVWAVLIENLARIGYEGKNLHMATYDWRLSFQNTEIRDQSLSRLKSKIELMFVTNGYKKVVVVPQSMGAIYFLHFLKWVETPPPMGGGGGPGWCDKHIKAIMNISPEFLGVPKAVSNIFSAEGSDAAFVRAVTSGVLNFDYLGLQTVEHVLRVCRTWDSIISLMPKGGETIWRDLHWGPKEGNKYEKRGHVKYFVSNNTYSCADMQNSLNVKEPINYGGINSVSKAVSQLLASLLSTLDSESEDILSNRISTTFNLTCENEMRRECIPNVGKRKATGRTDLDLHNFVAPKMMKRADAHFSHGIADNLDDPKYTHYKYWSNPLETKLPDAPNMEVYCLYGVEISTERSYVPKLSLSDKYKHIPFQINNSSDVQNGTKLQNDVYLVDGDERVNVVSSGFMCAKGWRRRTRFNPSSMATYIREYQQKQRGSVLEVRGLESGARVNNIMGNVALIEDILRVAAGATGANIGGDRIFSDIVRISERISLRL* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1605 628 Pfam Lecithin:cholesterol acyltransferase 92 567 IPR003386 GO:0006629|GO:0008374
Tpr4g1605 628 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 2-RELATED 3 628 - -
Tpr4g1605 628 Gene3D alpha/beta hydrolase 117 295 IPR029058 -
Tpr4g1605 628 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 3 628 - -
Tpr4g1605 628 SUPERFAMILY alpha/beta-Hydrolases 62 340 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1605 Tpr-Chr4 16136598 16143134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1605 2 628 Acyl Lipid Metabolism Gene Families AT3G44830 61.622 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1605 K00679 - cit:102608065 813.142