Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1598 ATGGGTACCCTGCTTCCAACCTCAACAGCAGAACATGAAAAATCAGAGAAGCACAATCCTTCTATACAAATCCAACAACAAAAAGATGTTGATGCAGGTGCTCTCTTTGTCCTCAAATCAAAAGGTTCATGGGTGCATTGTGGTTACCACTTGACAACATCAATTGTGGCCCCAGCACTTCTAAGTCTTCCATATGCTTTCACAATGCTTGGATGGACGGCTGGGATCTTTTGCTTAGTTATTGCAGCAATGGTGACTTTCTATTCTTACAATTTATTATCTCTTGTTCTTGAACATCAAGCTCAGTTGGGTAATCGTCAGCTACGATTTAGAGACATGGCTCGTGACATTTTAGGTCCTAAATGGGGTCGTTATTTTGTGGGGCCAATTCAGTTTGGAGTTTGCTATGGGGCTGTAGTGGCTTGTGCACTTTTGGGTGGTCAATGTATGAAGGCAATTTATGTGTTGTCAAACCCAAATGGGACTATGAAGCTTTACGAGTTTGTCACCATATTTGGTTGCTTCATGTTGATTTTGGCTCAAATCCCATCTTTTCACTCATTGAGACACATTAATCTTGTGTCTTTGGTTCTATGCTTACTCTATAGTGCTTGTGCTGCTGGAGGTTCTATATATATAGGAAACTCATCAAAAGGACCAGAAAAGAATTATTCTTTGAAAGGTGATACAGAAAATCGTTTATTTGGTGTCTTCAATGCTCTTAGCATCATTGCCACTACTTATGGAAATGGAATCATTCCTGAAATTCAGGCCACATTAGCACCACCAGTGAAAGGAAAGATGTTCAAGGCACTAAGTGTTTGTTATACAGTAGTTTGTGTCACTTTCTTTAGTGTAGCTATATCTGGTTATTGGGCATTTGGCAATGAATCTGAAGGACTTATCTTAAGCAACTTTGTAGACAATGGCAAGCCATTATTGCCTAAGTGGTTTATTTATATGACCAATGGTTTCACTATAGTACAATTATCAGCAGTTGGTGTGGTGTACTTACAACCTACAAATGAAGTATTAGAACAAGCATTTGGGGACCCAAAAAGCCCCGAGTTCTCGAGTCGCAATGTAATCCCAAGGGTGATTTCGCGATCATTAGCGATTACAGTTGCAACCATTATTGCAGCCATGCTTCCATTTTTTGGAGACATAAACTCACTTATTGGAGCTTTTGGTTTTATGCCACTTGACTTTGTTTTACCTGTAATTTTCTTTAACTTGACATTTAAGCCATCTAAGAGAAGTCCCATTTTCTGGTTGAATGTAACTATTGCTGTTGTTTTCTCTACTTTGGGAGCTATTGCAACAATTGCAGCTGTTAGACAGATAGTTATTGATGGCAAAAATTATCAACTATTTGCTAATGTATGA 1386 0.3874 MGTLLPTSTAEHEKSEKHNPSIQIQQQKDVDAGALFVLKSKGSWVHCGYHLTTSIVAPALLSLPYAFTMLGWTAGIFCLVIAAMVTFYSYNLLSLVLEHQAQLGNRQLRFRDMARDILGPKWGRYFVGPIQFGVCYGAVVACALLGGQCMKAIYVLSNPNGTMKLYEFVTIFGCFMLILAQIPSFHSLRHINLVSLVLCLLYSACAAGGSIYIGNSSKGPEKNYSLKGDTENRLFGVFNALSIIATTYGNGIIPEIQATLAPPVKGKMFKALSVCYTVVCVTFFSVAISGYWAFGNESEGLILSNFVDNGKPLLPKWFIYMTNGFTIVQLSAVGVVYLQPTNEVLEQAFGDPKSPEFSSRNVIPRVISRSLAITVATIIAAMLPFFGDINSLIGAFGFMPLDFVLPVIFFNLTFKPSKRSPIFWLNVTIAVVFSTLGAIATIAAVRQIVIDGKNYQLFANV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1598 461 MobiDBLite consensus disorder prediction 1 23 - -
Tpr4g1598 461 Pfam Transmembrane amino acid transporter protein 41 445 IPR013057 -
Tpr4g1598 461 PANTHER GABA TRANSPORTER 1 11 457 - -
Tpr4g1598 461 PANTHER OS05G0424000 PROTEIN-RELATED 11 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1598 Tpr-Chr4 16044371 16050220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1598 133 461 Organic Solute Cotransporters AT1G08230 65.559 8.12e-153 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1598 - - gmx:100791114 785.793