Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1596 ATGGGTGAATCAGAACCTAAAATTTTTATACCAGAGAGTTTTCAAGTGAACTATGATGTTTCCAGTCAAATTAAGATGATTTGGGAAGTGATGAAAGCACCATTGATTGTTCCTCTTTTGAATGCTTGTGTTTACATTTCATTAACAATGGCACTTATGCTTTTCATGGAAAGAGTTTATATGGGTATTGTTATTGTTTTAATTAAACTCTTTTGGAAAAAACCTGAACAACGTTATAACTATGAACCTCTTCAAGATGATGAAGAACTTGGTGGCTCTAATTTTCCTGTTGTTCTTGTTCAAATTCCAATGTTCAATGAAAGAGAGGTTTACAAGGTTTCGATTGGAGCAGCGTGTGGACTTTCATGGCCGACGGATCGACTCGTGATCCAAGTACTTGATGATTCTACTGACCCAGTGGTTAAGCAAATGGTGGAAATGGAATGCCAAAGATGGGCAAGTAAAGGAATAAATATAACATACCAAATAAGAGAAACAAGAGGTGGATACAAAGCAGGAGCATTAAAAGAAGGATTAAAACGTAGTTATGTCAAACATTGTGAATATGTTGTTATTTTTGATGCTGATTTTAGTCCACCACCTGGTTTTCTTAGAAGAGCTATTCCTTTTCTTGTTGGAAACCCTGAAATTGCTCTTGTTCAAGGTCGTTGGAGATTTGTGAATTCAAATGAGTGTTTGTTGACAAGAATGCAAGAGATGTCTCTGGATTATCATTTCACAGTTGAGCAAGAAGTTGGATCAGCTACTCATGCTTTCTTTGGTTTCAATGGGACTGCTGGTATTTGGAGAATAGCTGCAATCAACGAAGCAGGAGGGTGGAAAGACAGAACAACAGTCGAAGATATGGACCTTGCTGTTCGAGCAAGTCTTAGGGGATGGAAATTTTTGTACCTCGGAGACCTCCAAGCAAACAGTGAACTTCCAAGTACTTTGAGAGCCTTCAGATTCCAGCAGCACAGATGGTCTTGTGGTCCTGCTAATCTGTTCCGCAAAATGGCGATGGAGATTATAAGGAACAAGAAAGTGAGGTTCTGGAAGAAAGTGTATGTTATATACAGCTTTTTCTTCGTTCGCAAAATCGTAGCTCATATGGTCACTTTCTTCTTCTACTGTCTTGTAATCCCGCTCACAATTTTGGTCCCTGAGGTTCATGTTCCAATTTGGGGTGCCGTTTATATTCCTTCCATCATCACCATTCTCAACTCAGTCGGAACACCAAGGTCTATTCACCTTTTGTTCTATTGGATCCTTTTCGAGAATGTCATGTCTTTGCACCGTACCAAGGCTACCCTTATCGGTTTGTTTGAATACGGAAGGGCTAATGAATGGGTTGTAACTGAAAAACTCGGAGATTCTGTCAACAACAATATCAAAAACAAATCTGGAGATGCTGCCAAGAAGACTAATGCCAAAGTTCAAAAGAAAACAAGATCCAAATTTATGGAAAGGCTTAACTTTTTGGAGCTGGGATTTGCAGTGTTTCTATTCTTCTGTGGATGTTATGATTATAATTATGGGAAACACAACTACTTTATTTACCTCTTCCTTCAAACCTTAACCTTCTCAATTGTTGGATTTGGTTATGTTGGAACCATAGTGTAA 1623 0.3851 MGESEPKIFIPESFQVNYDVSSQIKMIWEVMKAPLIVPLLNACVYISLTMALMLFMERVYMGIVIVLIKLFWKKPEQRYNYEPLQDDEELGGSNFPVVLVQIPMFNEREVYKVSIGAACGLSWPTDRLVIQVLDDSTDPVVKQMVEMECQRWASKGINITYQIRETRGGYKAGALKEGLKRSYVKHCEYVVIFDADFSPPPGFLRRAIPFLVGNPEIALVQGRWRFVNSNECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQANSELPSTLRAFRFQQHRWSCGPANLFRKMAMEIIRNKKVRFWKKVYVIYSFFFVRKIVAHMVTFFFYCLVIPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATLIGLFEYGRANEWVVTEKLGDSVNNNIKNKSGDAAKKTNAKVQKKTRSKFMERLNFLELGFAVFLFFCGCYDYNYGKHNYFIYLFLQTLTFSIVGFGYVGTIV* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1596 540 Pfam Glycosyl transferase family group 2 189 381 IPR001173 -
Tpr4g1596 540 SUPERFAMILY Nucleotide-diphospho-sugar transferases 93 375 IPR029044 -
Tpr4g1596 540 PANTHER - 5 540 - -
Tpr4g1596 540 CDD CESA_CaSu_A2 96 332 - -
Tpr4g1596 540 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 315 IPR029044 -
Tpr4g1596 540 PANTHER BNAC09G36340D PROTEIN 5 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1596 Tpr-Chr4 15986983 15993474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1596 1 540 Miscellaneous Gene Families AT5G22740 79.520 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1596 K13680 - gmx:100791645 997.653