Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1538 ATGGATTCTCAGATAATGCAAGACTTCCTCAAGGGAAAGACTATTCTAGTCACTGGGGCAACTGGATTCTTAGCAAAAGTTTTTGTGGAAAAGATATTGAGGATCCAACCAGAGATACAAAAAATGTATCTACTCCTAAGAGCTTCCAACACGGAATTGGCAGAAAAACGTTTGCAAAATGAGGTTTTTGAAAGTGATTTATTTCGCGTACTACGAGACAAATTGGGTGAAAATTTCGGTTCTTTCATATCAAAGAAGGTTGTGACAATAGCAGGTGATGTTGCTATTGAAAATTTGGGAATAAAAGATGAAAAGATTAAAAATGAGATATTAGAAGAGATAGACTTTTTTGTCCATTCTGCTGCATCTACCAAATTTAATGAAAGATTTGACATATTGATGGATGTTAATACCAAAGGTGCTTTACATGCCTTGAACATGGCAAAGAATTGTAAAAGAATAAAGGCTTTTGTGCACATATCGACCGCATATGTATGCGGAGATGCTAAGGATGGACATGGAATTTTAAGAGAGAAACCATTTGAGATGGGTCAATCCCTGAAAGAGGACTCTAAATTAGACATACACAAAGAAATGGATTTGATAGAGAGAAAATTAGCTGAACTCAAAGCAATGAAAGTAGATGAAAATACAACAAAATTTGCAATGAAAGATTATGGAATGGAAAGAGCAAATTTTCACGGTTGGCCAAATACATATACATTCACAAAAGCAATGGGAGAGATGCTTTTAGTGCATCATAAAGATAATATACCTTTGATTATTATACGCCCCACAATAGTAACTAGTACAAGAAAAGATCCTTTCCCCGGTTGGATTGAAGGTTTAAGAACTATTGACAGTGCGATATATAGCTATGGTAAAGGGAAATTGAAATTCTTCATTGGTAATCCCAACACAATTATAGATGCGATACCTGCAGACATGGTCATCAATTGTGTGATTACAGCCATTTTTATTCATTCACATAAACCTCCTAAGAATTTCATCTACCATGTTTCTTCATCATTAAGAAATCCTCTCAAATATATTGATTTAAGCAATATTAGCCATAATTATTTCAAAAATAACCCTTGCATAAATCAAAATGGAAAGCCAATAATCACTTCCAAGGTACTTGTGGTGAATAGTTTTGCTGCTTTCAACATTTTTATGATAATCCGATATGTCTTGCTACTACAGGTCTTATATTTGGTGAACAAAATTTGTCGACGGAGCTTCCAAGATGTTTATGATAACACTAGTAGAAAATTTAGAGTGCATCAGCAATTGGCAAAACTATACCAACCATATGTATTTTTTAAGTCCGTCTTTGATGATACCAACGTTGAAATTTTGCGAATGGCAACAAAAAGTCTTAAGATAGAGAATGATGAACTGAACTTTGACCCTACTAGAATTGACTGGACAGACTATATGATGAATACACATATTCCTGGCTTCCTCAAGTATCACAAGAAATAA 1485 0.3421 MDSQIMQDFLKGKTILVTGATGFLAKVFVEKILRIQPEIQKMYLLLRASNTELAEKRLQNEVFESDLFRVLRDKLGENFGSFISKKVVTIAGDVAIENLGIKDEKIKNEILEEIDFFVHSAASTKFNERFDILMDVNTKGALHALNMAKNCKRIKAFVHISTAYVCGDAKDGHGILREKPFEMGQSLKEDSKLDIHKEMDLIERKLAELKAMKVDENTTKFAMKDYGMERANFHGWPNTYTFTKAMGEMLLVHHKDNIPLIIIRPTIVTSTRKDPFPGWIEGLRTIDSAIYSYGKGKLKFFIGNPNTIIDAIPADMVINCVITAIFIHSHKPPKNFIYHVSSSLRNPLKYIDLSNISHNYFKNNPCINQNGKPIITSKVLVVNSFAAFNIFMIIRYVLLLQVLYLVNKICRRSFQDVYDNTSRKFRVHQQLAKLYQPYVFFKSVFDDTNVEILRMATKSLKIENDELNFDPTRIDWTDYMMNTHIPGFLKYHKK* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1538 494 CDD FAR-N_SDR_e 13 365 - -
Tpr4g1538 494 PANTHER FATTY ACYL-COA REDUCTASE 7 491 - -
Tpr4g1538 494 Pfam Male sterility protein 396 492 IPR033640 -
Tpr4g1538 494 Gene3D - 3 377 - -
Tpr4g1538 494 PANTHER MALE STERILITY PROTEIN 2-RELATED 7 491 IPR026055 GO:0080019
Tpr4g1538 494 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 341 IPR036291 -
Tpr4g1538 494 Pfam Male sterility protein 17 320 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1538 Tpr-Chr4 15182977 15191075 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1538 9 445 Acyl Lipid Metabolism Gene Families AT3G44560 50.569 2.04e-149 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1538 K13356 - gmx:100793736 528.865